Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
CcnkO88874 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CcnkO88874 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC10.86□□□□□ -0.67
CcnkO88874 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CcnkO88874 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CcnkO88874 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC10.86□□□□□ -0.67
CcnkO88874 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
CcnkO88874 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CcnkO88874 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CcnkO88874 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CcnkO88874 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CcnkO88874 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CcnkO88874 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC10.86□□□□□ -0.67
CcnkO88874 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CcnkO88874 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CcnkO88874 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CcnkO88874 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC10.86□□□□□ -0.67
CcnkO88874 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC10.86□□□□□ -0.67
CcnkO88874 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CcnkO88874 Gm29649-201ENSMUST00000185649 419 ntBASIC10.86□□□□□ -0.67
CcnkO88874 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC10.86□□□□□ -0.67
CcnkO88874 Gm5035-201ENSMUST00000215581 927 ntBASIC10.86□□□□□ -0.67
CcnkO88874 AC153962.4-201ENSMUST00000217878 242 ntBASIC10.86□□□□□ -0.67
CcnkO88874 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CcnkO88874 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
CcnkO88874 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
CcnkO88874 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CcnkO88874 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
CcnkO88874 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC10.86□□□□□ -0.67
CcnkO88874 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CcnkO88874 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CcnkO88874 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CcnkO88874 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CcnkO88874 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
CcnkO88874 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CcnkO88874 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CcnkO88874 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CcnkO88874 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CcnkO88874 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
CcnkO88874 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
CcnkO88874 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CcnkO88874 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
CcnkO88874 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC10.85□□□□□ -0.67
CcnkO88874 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CcnkO88874 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
CcnkO88874 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CcnkO88874 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CcnkO88874 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CcnkO88874 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
CcnkO88874 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CcnkO88874 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC10.85□□□□□ -0.67
CcnkO88874 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CcnkO88874 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
CcnkO88874 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
CcnkO88874 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CcnkO88874 CT009713.5-203ENSMUST00000224218 2079 ntBASIC10.85□□□□□ -0.67
CcnkO88874 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
CcnkO88874 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CcnkO88874 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
CcnkO88874 Gm13369-201ENSMUST00000119442 987 ntBASIC10.85□□□□□ -0.67
CcnkO88874 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC10.85□□□□□ -0.67
CcnkO88874 Gm16479-201ENSMUST00000121706 932 ntBASIC10.85□□□□□ -0.67
CcnkO88874 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CcnkO88874 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CcnkO88874 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CcnkO88874 Gm24644-201ENSMUST00000157114 139 ntBASIC10.85□□□□□ -0.67
CcnkO88874 Gm26185-201ENSMUST00000157692 266 ntBASIC10.85□□□□□ -0.67
CcnkO88874 Gm27331-201ENSMUST00000183705 60 ntBASIC10.85□□□□□ -0.67
CcnkO88874 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC10.85□□□□□ -0.67
CcnkO88874 Gm44799-201ENSMUST00000207639 1202 ntBASIC10.85□□□□□ -0.67
CcnkO88874 Gm7561-201ENSMUST00000211203 886 ntBASIC10.85□□□□□ -0.67
CcnkO88874 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC10.85□□□□□ -0.67
CcnkO88874 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC10.85□□□□□ -0.67
CcnkO88874 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CcnkO88874 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CcnkO88874 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
CcnkO88874 AC126257.2-201ENSMUST00000215507 2300 ntBASIC10.85□□□□□ -0.67
CcnkO88874 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CcnkO88874 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CcnkO88874 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
CcnkO88874 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CcnkO88874 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
CcnkO88874 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CcnkO88874 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CcnkO88874 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
CcnkO88874 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
CcnkO88874 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
CcnkO88874 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
CcnkO88874 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CcnkO88874 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CcnkO88874 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CcnkO88874 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CcnkO88874 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
CcnkO88874 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CcnkO88874 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CcnkO88874 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC10.84□□□□□ -0.67
CcnkO88874 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CcnkO88874 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CcnkO88874 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
CcnkO88874 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms