Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col5a1O88207 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC10.81□□□□□ -0.68
Col5a1O88207 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col5a1O88207 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col5a1O88207 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Col5a1O88207 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC10.81□□□□□ -0.68
Col5a1O88207 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Col5a1O88207 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Col5a1O88207 Gm18367-201ENSMUST00000176139 600 ntBASIC10.81□□□□□ -0.68
Col5a1O88207 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Col5a1O88207 Gm9507-202ENSMUST00000180157 654 ntBASIC10.81□□□□□ -0.68
Col5a1O88207 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col5a1O88207 Gm29763-201ENSMUST00000205306 616 ntBASIC10.81□□□□□ -0.68
Col5a1O88207 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC10.81□□□□□ -0.68
Col5a1O88207 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col5a1O88207 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC10.81□□□□□ -0.68
Col5a1O88207 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Col5a1O88207 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col5a1O88207 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Col5a1O88207 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Col5a1O88207 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.81□□□□□ -0.68
Col5a1O88207 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col5a1O88207 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Col5a1O88207 Gm6170-201ENSMUST00000187672 1388 ntBASIC10.81□□□□□ -0.68
Col5a1O88207 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col5a1O88207 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col5a1O88207 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col5a1O88207 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC10.81□□□□□ -0.68
Col5a1O88207 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col5a1O88207 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col5a1O88207 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col5a1O88207 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col5a1O88207 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col5a1O88207 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col5a1O88207 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC10.81□□□□□ -0.68
Col5a1O88207 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Col5a1O88207 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col5a1O88207 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col5a1O88207 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC10.81□□□□□ -0.68
Col5a1O88207 Gm15004-201ENSMUST00000119192 630 ntBASIC10.81□□□□□ -0.68
Col5a1O88207 Gm15610-201ENSMUST00000120584 195 ntBASIC10.81□□□□□ -0.68
Col5a1O88207 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Col5a1O88207 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC10.81□□□□□ -0.68
Col5a1O88207 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC10.81□□□□□ -0.68
Col5a1O88207 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC10.81□□□□□ -0.68
Col5a1O88207 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Col5a1O88207 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Col5a1O88207 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col5a1O88207 AC238811.4-201ENSMUST00000178019 1246 ntBASIC10.81□□□□□ -0.68
Col5a1O88207 AC238940.3-201ENSMUST00000178830 1246 ntBASIC10.81□□□□□ -0.68
Col5a1O88207 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Col5a1O88207 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Col5a1O88207 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Col5a1O88207 Gm43912-201ENSMUST00000204352 538 ntBASIC10.81□□□□□ -0.68
Col5a1O88207 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC10.81□□□□□ -0.68
Col5a1O88207 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Col5a1O88207 AC164087.2-201ENSMUST00000216206 1072 ntBASIC10.81□□□□□ -0.68
Col5a1O88207 AC157950.1-201ENSMUST00000217561 2168 ntBASIC10.81□□□□□ -0.68
Col5a1O88207 AC158388.3-202ENSMUST00000225517 775 ntBASIC10.81□□□□□ -0.68
Col5a1O88207 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col5a1O88207 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Col5a1O88207 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col5a1O88207 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC10.81□□□□□ -0.68
Col5a1O88207 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col5a1O88207 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Col5a1O88207 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Col5a1O88207 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Col5a1O88207 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Col5a1O88207 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
Col5a1O88207 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col5a1O88207 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col5a1O88207 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col5a1O88207 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col5a1O88207 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col5a1O88207 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col5a1O88207 CT009489.1-201ENSMUST00000227740 1893 ntBASIC10.8□□□□□ -0.68
Col5a1O88207 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col5a1O88207 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col5a1O88207 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col5a1O88207 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
Col5a1O88207 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col5a1O88207 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col5a1O88207 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col5a1O88207 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col5a1O88207 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col5a1O88207 Gm24791-201ENSMUST00000104284 131 ntBASIC10.8□□□□□ -0.68
Col5a1O88207 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col5a1O88207 Gm14034-201ENSMUST00000120147 551 ntBASIC10.8□□□□□ -0.68
Col5a1O88207 Gm5555-201ENSMUST00000120352 1111 ntBASIC10.8□□□□□ -0.68
Col5a1O88207 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
Col5a1O88207 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col5a1O88207 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.8□□□□□ -0.68
Col5a1O88207 Gm6114-201ENSMUST00000182472 968 ntBASIC10.8□□□□□ -0.68
Col5a1O88207 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC10.8□□□□□ -0.68
Col5a1O88207 Gm9916-201ENSMUST00000192943 1228 ntBASIC10.8□□□□□ -0.68
Col5a1O88207 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC10.8□□□□□ -0.68
Col5a1O88207 Gm43854-201ENSMUST00000200418 394 ntBASIC10.8□□□□□ -0.68
Col5a1O88207 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC10.8□□□□□ -0.68
Col5a1O88207 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col5a1O88207 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms