Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pfdn2O70591 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pfdn2O70591 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pfdn2O70591 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pfdn2O70591 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pfdn2O70591 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pfdn2O70591 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pfdn2O70591 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC10.24□□□□□ -0.77
Pfdn2O70591 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pfdn2O70591 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pfdn2O70591 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pfdn2O70591 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
Pfdn2O70591 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pfdn2O70591 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC10.24□□□□□ -0.77
Pfdn2O70591 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pfdn2O70591 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pfdn2O70591 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pfdn2O70591 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pfdn2O70591 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pfdn2O70591 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pfdn2O70591 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Pfdn2O70591 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pfdn2O70591 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pfdn2O70591 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pfdn2O70591 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pfdn2O70591 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pfdn2O70591 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pfdn2O70591 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pfdn2O70591 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pfdn2O70591 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Pfdn2O70591 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pfdn2O70591 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Pfdn2O70591 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Pfdn2O70591 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pfdn2O70591 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC10.23□□□□□ -0.77
Pfdn2O70591 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pfdn2O70591 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pfdn2O70591 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pfdn2O70591 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC10.23□□□□□ -0.77
Pfdn2O70591 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pfdn2O70591 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pfdn2O70591 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Pfdn2O70591 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pfdn2O70591 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC10.23□□□□□ -0.77
Pfdn2O70591 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC10.23□□□□□ -0.77
Pfdn2O70591 Gm45195-201ENSMUST00000205597 1008 ntBASIC10.23□□□□□ -0.77
Pfdn2O70591 Gm18307-201ENSMUST00000206864 949 ntBASIC10.23□□□□□ -0.77
Pfdn2O70591 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC10.23□□□□□ -0.77
Pfdn2O70591 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC10.23□□□□□ -0.77
Pfdn2O70591 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC10.23□□□□□ -0.77
Pfdn2O70591 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pfdn2O70591 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pfdn2O70591 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
Pfdn2O70591 Atg2a-201ENSMUST00000045351 6371 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pfdn2O70591 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Pfdn2O70591 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pfdn2O70591 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pfdn2O70591 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Pfdn2O70591 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC10.23□□□□□ -0.77
Pfdn2O70591 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC10.23□□□□□ -0.77
Pfdn2O70591 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC10.23□□□□□ -0.77
Pfdn2O70591 Syt7-204ENSMUST00000223586 1344 ntBASIC10.23□□□□□ -0.77
Pfdn2O70591 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pfdn2O70591 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Pfdn2O70591 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pfdn2O70591 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pfdn2O70591 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Pfdn2O70591 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Pfdn2O70591 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pfdn2O70591 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC10.23□□□□□ -0.77
Pfdn2O70591 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Pfdn2O70591 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pfdn2O70591 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pfdn2O70591 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC10.22□□□□□ -0.77
Pfdn2O70591 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pfdn2O70591 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pfdn2O70591 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pfdn2O70591 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pfdn2O70591 Gtf2h3-201ENSMUST00000031333 2672 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pfdn2O70591 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pfdn2O70591 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Pfdn2O70591 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Pfdn2O70591 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pfdn2O70591 Slc27a5-201ENSMUST00000032539 2288 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pfdn2O70591 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pfdn2O70591 Piwil1-202ENSMUST00000195959 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pfdn2O70591 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pfdn2O70591 Gm15074-201ENSMUST00000117603 936 ntBASIC10.22□□□□□ -0.77
Pfdn2O70591 Gm15376-201ENSMUST00000122258 783 ntBASIC10.22□□□□□ -0.77
Pfdn2O70591 Gm16342-201ENSMUST00000124025 1025 ntBASIC10.22□□□□□ -0.77
Pfdn2O70591 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Pfdn2O70591 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Pfdn2O70591 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC10.22□□□□□ -0.77
Pfdn2O70591 Gm29608-201ENSMUST00000190444 463 ntBASIC10.22□□□□□ -0.77
Pfdn2O70591 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Pfdn2O70591 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC10.22□□□□□ -0.77
Pfdn2O70591 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC10.22□□□□□ -0.77
Pfdn2O70591 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC10.22□□□□□ -0.77
Pfdn2O70591 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pfdn2O70591 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms