Protein–RNA interactions for Protein: O70480

Vamp4, Vesicle-associated membrane protein 4, mousemouse

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp4O70480 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vamp4O70480 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Vamp4O70480 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Vamp4O70480 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC15.26■□□□□ 0.03
Vamp4O70480 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vamp4O70480 Gm23596-201ENSMUST00000104304 132 ntBASIC15.26■□□□□ 0.03
Vamp4O70480 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Vamp4O70480 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vamp4O70480 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Vamp4O70480 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vamp4O70480 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Vamp4O70480 Gm9192-201ENSMUST00000183221 985 ntBASIC15.26■□□□□ 0.03
Vamp4O70480 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vamp4O70480 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vamp4O70480 CT025694.1-201ENSMUST00000226188 934 ntBASIC15.26■□□□□ 0.03
Vamp4O70480 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vamp4O70480 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vamp4O70480 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vamp4O70480 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC15.26■□□□□ 0.03
Vamp4O70480 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC15.26■□□□□ 0.03
Vamp4O70480 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vamp4O70480 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vamp4O70480 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vamp4O70480 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vamp4O70480 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Vamp4O70480 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vamp4O70480 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vamp4O70480 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vamp4O70480 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC15.25■□□□□ 0.03
Vamp4O70480 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC15.25■□□□□ 0.03
Vamp4O70480 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vamp4O70480 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vamp4O70480 Zfp125-201ENSMUST00000079237 2488 ntBASIC15.25■□□□□ 0.03
Vamp4O70480 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vamp4O70480 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vamp4O70480 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vamp4O70480 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vamp4O70480 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vamp4O70480 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vamp4O70480 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vamp4O70480 Gm15515-201ENSMUST00000117827 822 ntBASIC15.25■□□□□ 0.03
Vamp4O70480 Gm14441-201ENSMUST00000121960 540 ntBASIC15.25■□□□□ 0.03
Vamp4O70480 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Vamp4O70480 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vamp4O70480 Mir7677-201ENSMUST00000184226 67 ntBASIC15.25■□□□□ 0.03
Vamp4O70480 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC15.25■□□□□ 0.03
Vamp4O70480 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC15.25■□□□□ 0.03
Vamp4O70480 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
Vamp4O70480 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC15.25■□□□□ 0.03
Vamp4O70480 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vamp4O70480 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vamp4O70480 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vamp4O70480 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC15.25■□□□□ 0.03
Vamp4O70480 Gm45428-201ENSMUST00000209619 1789 ntBASIC15.25■□□□□ 0.03
Vamp4O70480 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC15.25■□□□□ 0.03
Vamp4O70480 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Vamp4O70480 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Vamp4O70480 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC15.25■□□□□ 0.03
Vamp4O70480 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vamp4O70480 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vamp4O70480 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vamp4O70480 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Vamp4O70480 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Vamp4O70480 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vamp4O70480 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vamp4O70480 AC108858.2-201ENSMUST00000228186 1425 ntBASIC15.25■□□□□ 0.03
Vamp4O70480 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vamp4O70480 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vamp4O70480 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vamp4O70480 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vamp4O70480 Gm13812-201ENSMUST00000118061 1347 ntBASIC15.24■□□□□ 0.03
Vamp4O70480 Gm13810-201ENSMUST00000118584 1347 ntBASIC15.24■□□□□ 0.03
Vamp4O70480 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vamp4O70480 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vamp4O70480 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vamp4O70480 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vamp4O70480 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vamp4O70480 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Vamp4O70480 Gm12266-201ENSMUST00000120311 962 ntBASIC15.24■□□□□ 0.03
Vamp4O70480 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC15.24■□□□□ 0.03
Vamp4O70480 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vamp4O70480 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vamp4O70480 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Vamp4O70480 Gm37466-201ENSMUST00000195692 652 ntBASIC15.24■□□□□ 0.03
Vamp4O70480 Gm35960-201ENSMUST00000202712 767 ntBASIC15.24■□□□□ 0.03
Vamp4O70480 Gm9445-201ENSMUST00000207454 1285 ntBASIC15.24■□□□□ 0.03
Vamp4O70480 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC15.24■□□□□ 0.03
Vamp4O70480 Gm18730-201ENSMUST00000218038 343 ntBASIC15.24■□□□□ 0.03
Vamp4O70480 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vamp4O70480 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Vamp4O70480 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC15.24■□□□□ 0.03
Vamp4O70480 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vamp4O70480 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vamp4O70480 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vamp4O70480 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vamp4O70480 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vamp4O70480 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vamp4O70480 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vamp4O70480 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vamp4O70480 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms