Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pdlim1O70400 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pdlim1O70400 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Pdlim1O70400 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.04□□□□□ -0.48
Pdlim1O70400 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pdlim1O70400 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Pdlim1O70400 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.04□□□□□ -0.48
Pdlim1O70400 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pdlim1O70400 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.04□□□□□ -0.48
Pdlim1O70400 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.04□□□□□ -0.48
Pdlim1O70400 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.04□□□□□ -0.48
Pdlim1O70400 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pdlim1O70400 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pdlim1O70400 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pdlim1O70400 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Pdlim1O70400 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pdlim1O70400 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pdlim1O70400 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pdlim1O70400 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pdlim1O70400 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pdlim1O70400 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pdlim1O70400 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.04□□□□□ -0.48
Pdlim1O70400 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Pdlim1O70400 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pdlim1O70400 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim1O70400 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim1O70400 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim1O70400 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim1O70400 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim1O70400 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Pdlim1O70400 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Pdlim1O70400 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim1O70400 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.03□□□□□ -0.48
Pdlim1O70400 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.03□□□□□ -0.48
Pdlim1O70400 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim1O70400 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.03□□□□□ -0.48
Pdlim1O70400 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim1O70400 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim1O70400 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim1O70400 Mir877-201ENSMUST00000104738 85 ntBASIC12.03□□□□□ -0.48
Pdlim1O70400 Gm14130-201ENSMUST00000118417 987 ntBASIC12.03□□□□□ -0.48
Pdlim1O70400 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.03□□□□□ -0.48
Pdlim1O70400 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.03□□□□□ -0.48
Pdlim1O70400 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Pdlim1O70400 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim1O70400 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim1O70400 Gm25700-201ENSMUST00000177693 110 ntBASIC12.03□□□□□ -0.48
Pdlim1O70400 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.03□□□□□ -0.48
Pdlim1O70400 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.03□□□□□ -0.48
Pdlim1O70400 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.03□□□□□ -0.48
Pdlim1O70400 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Pdlim1O70400 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.03□□□□□ -0.48
Pdlim1O70400 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Pdlim1O70400 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim1O70400 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim1O70400 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim1O70400 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim1O70400 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.03□□□□□ -0.48
Pdlim1O70400 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.03□□□□□ -0.48
Pdlim1O70400 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim1O70400 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.03□□□□□ -0.48
Pdlim1O70400 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.03□□□□□ -0.48
Pdlim1O70400 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim1O70400 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim1O70400 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.03□□□□□ -0.48
Pdlim1O70400 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim1O70400 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim1O70400 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.03□□□□□ -0.48
Pdlim1O70400 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim1O70400 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim1O70400 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim1O70400 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim1O70400 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim1O70400 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Pdlim1O70400 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim1O70400 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pdlim1O70400 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Pdlim1O70400 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.48
Pdlim1O70400 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Pdlim1O70400 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Pdlim1O70400 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Pdlim1O70400 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pdlim1O70400 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pdlim1O70400 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Pdlim1O70400 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pdlim1O70400 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pdlim1O70400 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pdlim1O70400 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pdlim1O70400 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pdlim1O70400 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pdlim1O70400 Gm11511-201ENSMUST00000118146 540 ntBASIC12.02□□□□□ -0.49
Pdlim1O70400 Gm13996-201ENSMUST00000118456 430 ntBASIC12.02□□□□□ -0.49
Pdlim1O70400 Gm12036-201ENSMUST00000120008 530 ntBASIC12.02□□□□□ -0.49
Pdlim1O70400 Gm15610-201ENSMUST00000120584 195 ntBASIC12.02□□□□□ -0.49
Pdlim1O70400 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pdlim1O70400 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.02□□□□□ -0.49
Pdlim1O70400 Gm38241-201ENSMUST00000192641 898 ntBASIC12.02□□□□□ -0.49
Pdlim1O70400 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.02□□□□□ -0.49
Pdlim1O70400 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.02□□□□□ -0.49
Pdlim1O70400 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms