Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chrna4O70174 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chrna4O70174 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Chrna4O70174 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chrna4O70174 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chrna4O70174 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chrna4O70174 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chrna4O70174 Gm22323-201ENSMUST00000103832 109 ntBASIC12.24□□□□□ -0.45
Chrna4O70174 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chrna4O70174 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.24□□□□□ -0.45
Chrna4O70174 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.24□□□□□ -0.45
Chrna4O70174 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.24□□□□□ -0.45
Chrna4O70174 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.24□□□□□ -0.45
Chrna4O70174 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Chrna4O70174 Gm12164-201ENSMUST00000121695 551 ntBASIC12.24□□□□□ -0.45
Chrna4O70174 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.24□□□□□ -0.45
Chrna4O70174 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chrna4O70174 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.24□□□□□ -0.45
Chrna4O70174 Gm6963-201ENSMUST00000147879 379 ntBASIC12.24□□□□□ -0.45
Chrna4O70174 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chrna4O70174 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Chrna4O70174 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Chrna4O70174 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.24□□□□□ -0.45
Chrna4O70174 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chrna4O70174 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chrna4O70174 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chrna4O70174 Gm37259-201ENSMUST00000193903 849 ntBASIC12.24□□□□□ -0.45
Chrna4O70174 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chrna4O70174 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chrna4O70174 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.24□□□□□ -0.45
Chrna4O70174 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.24□□□□□ -0.45
Chrna4O70174 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chrna4O70174 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Chrna4O70174 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.24□□□□□ -0.45
Chrna4O70174 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.24□□□□□ -0.45
Chrna4O70174 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chrna4O70174 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chrna4O70174 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chrna4O70174 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chrna4O70174 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.24□□□□□ -0.45
Chrna4O70174 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chrna4O70174 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chrna4O70174 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chrna4O70174 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chrna4O70174 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chrna4O70174 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chrna4O70174 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chrna4O70174 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chrna4O70174 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chrna4O70174 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chrna4O70174 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Chrna4O70174 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chrna4O70174 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Chrna4O70174 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chrna4O70174 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chrna4O70174 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.23□□□□□ -0.45
Chrna4O70174 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Chrna4O70174 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chrna4O70174 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chrna4O70174 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Chrna4O70174 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chrna4O70174 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.23□□□□□ -0.45
Chrna4O70174 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chrna4O70174 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Chrna4O70174 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chrna4O70174 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chrna4O70174 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Chrna4O70174 Gm11989-201ENSMUST00000117240 672 ntBASIC12.23□□□□□ -0.45
Chrna4O70174 Gm11362-201ENSMUST00000118838 850 ntBASIC12.23□□□□□ -0.45
Chrna4O70174 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.23□□□□□ -0.45
Chrna4O70174 Gm14381-201ENSMUST00000122105 414 ntBASIC12.23□□□□□ -0.45
Chrna4O70174 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Chrna4O70174 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.23□□□□□ -0.45
Chrna4O70174 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.23□□□□□ -0.45
Chrna4O70174 Gm9230-201ENSMUST00000188228 532 ntBASIC12.23□□□□□ -0.45
Chrna4O70174 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.23□□□□□ -0.45
Chrna4O70174 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.23□□□□□ -0.45
Chrna4O70174 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.23□□□□□ -0.45
Chrna4O70174 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.23□□□□□ -0.45
Chrna4O70174 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chrna4O70174 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chrna4O70174 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chrna4O70174 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chrna4O70174 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chrna4O70174 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chrna4O70174 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chrna4O70174 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Chrna4O70174 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chrna4O70174 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chrna4O70174 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chrna4O70174 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chrna4O70174 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chrna4O70174 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.23□□□□□ -0.45
Chrna4O70174 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chrna4O70174 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.23□□□□□ -0.45
Chrna4O70174 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Chrna4O70174 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chrna4O70174 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Chrna4O70174 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Chrna4O70174 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms