Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ldb2O55203 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ldb2O55203 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.07□□□□□ -0.48
Ldb2O55203 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ldb2O55203 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ldb2O55203 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Ldb2O55203 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.06□□□□□ -0.48
Ldb2O55203 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ldb2O55203 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ldb2O55203 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Ldb2O55203 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ldb2O55203 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ldb2O55203 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ldb2O55203 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ldb2O55203 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ldb2O55203 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ldb2O55203 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ldb2O55203 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ldb2O55203 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ldb2O55203 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.06□□□□□ -0.48
Ldb2O55203 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ldb2O55203 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ldb2O55203 Gm14381-201ENSMUST00000122105 414 ntBASIC12.06□□□□□ -0.48
Ldb2O55203 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.06□□□□□ -0.48
Ldb2O55203 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.06□□□□□ -0.48
Ldb2O55203 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ldb2O55203 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.06□□□□□ -0.48
Ldb2O55203 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ldb2O55203 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ldb2O55203 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ldb2O55203 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ldb2O55203 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ldb2O55203 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ldb2O55203 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ldb2O55203 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ldb2O55203 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ldb2O55203 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ldb2O55203 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.05□□□□□ -0.48
Ldb2O55203 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.05□□□□□ -0.48
Ldb2O55203 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ldb2O55203 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ldb2O55203 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Ldb2O55203 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ldb2O55203 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ldb2O55203 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ldb2O55203 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ldb2O55203 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ldb2O55203 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ldb2O55203 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ldb2O55203 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Ldb2O55203 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ldb2O55203 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ldb2O55203 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.05□□□□□ -0.48
Ldb2O55203 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ldb2O55203 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.05□□□□□ -0.48
Ldb2O55203 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ldb2O55203 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ldb2O55203 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ldb2O55203 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Ldb2O55203 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ldb2O55203 Gm20482-202ENSMUST00000174729 825 ntBASIC12.05□□□□□ -0.48
Ldb2O55203 AA914427-201ENSMUST00000193194 1166 ntBASIC12.05□□□□□ -0.48
Ldb2O55203 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.05□□□□□ -0.48
Ldb2O55203 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ldb2O55203 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ldb2O55203 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ldb2O55203 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ldb2O55203 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ldb2O55203 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ldb2O55203 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Ldb2O55203 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ldb2O55203 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Ldb2O55203 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ldb2O55203 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ldb2O55203 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ldb2O55203 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ldb2O55203 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ldb2O55203 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ldb2O55203 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ldb2O55203 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ldb2O55203 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Ldb2O55203 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ldb2O55203 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ldb2O55203 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ldb2O55203 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ldb2O55203 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ldb2O55203 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ldb2O55203 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ldb2O55203 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ldb2O55203 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ldb2O55203 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ldb2O55203 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ldb2O55203 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ldb2O55203 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ldb2O55203 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ldb2O55203 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ldb2O55203 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.04□□□□□ -0.48
Ldb2O55203 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ldb2O55203 Gm5419-201ENSMUST00000119301 527 ntBASIC12.04□□□□□ -0.48
Ldb2O55203 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms