Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Gm25043-201ENSMUST00000158604 212 ntBASIC12.28□□□□□ -0.44
ChkaO54804 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ChkaO54804 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.28□□□□□ -0.44
ChkaO54804 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ChkaO54804 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ChkaO54804 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ChkaO54804 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ChkaO54804 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.28□□□□□ -0.44
ChkaO54804 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ChkaO54804 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ChkaO54804 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.28□□□□□ -0.44
ChkaO54804 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.28□□□□□ -0.44
ChkaO54804 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.28□□□□□ -0.44
ChkaO54804 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ChkaO54804 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ChkaO54804 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ChkaO54804 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
ChkaO54804 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.28□□□□□ -0.44
ChkaO54804 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ChkaO54804 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ChkaO54804 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
ChkaO54804 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
ChkaO54804 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
ChkaO54804 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ChkaO54804 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
ChkaO54804 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
ChkaO54804 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
ChkaO54804 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.27□□□□□ -0.44
ChkaO54804 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
ChkaO54804 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ChkaO54804 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
ChkaO54804 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.27□□□□□ -0.44
ChkaO54804 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
ChkaO54804 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ChkaO54804 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ChkaO54804 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.27□□□□□ -0.45
ChkaO54804 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.27□□□□□ -0.45
ChkaO54804 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
ChkaO54804 Gm4986-201ENSMUST00000119731 549 ntBASIC12.27□□□□□ -0.45
ChkaO54804 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.27□□□□□ -0.45
ChkaO54804 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.27□□□□□ -0.45
ChkaO54804 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ChkaO54804 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ChkaO54804 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ChkaO54804 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
ChkaO54804 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ChkaO54804 Gm2546-201ENSMUST00000182630 991 ntBASIC12.27□□□□□ -0.45
ChkaO54804 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.27□□□□□ -0.45
ChkaO54804 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
ChkaO54804 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.27□□□□□ -0.45
ChkaO54804 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.27□□□□□ -0.45
ChkaO54804 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
ChkaO54804 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.27□□□□□ -0.45
ChkaO54804 Gm9823-201ENSMUST00000051212 327 ntBASIC12.27□□□□□ -0.45
ChkaO54804 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ChkaO54804 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ChkaO54804 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
ChkaO54804 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
ChkaO54804 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
ChkaO54804 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ChkaO54804 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
ChkaO54804 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ChkaO54804 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ChkaO54804 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ChkaO54804 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ChkaO54804 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
ChkaO54804 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ChkaO54804 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ChkaO54804 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ChkaO54804 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
ChkaO54804 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ChkaO54804 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ChkaO54804 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ChkaO54804 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
ChkaO54804 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.26□□□□□ -0.45
ChkaO54804 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.26□□□□□ -0.45
ChkaO54804 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
ChkaO54804 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ChkaO54804 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
ChkaO54804 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ChkaO54804 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ChkaO54804 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ChkaO54804 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
ChkaO54804 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.26□□□□□ -0.45
ChkaO54804 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ChkaO54804 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.26□□□□□ -0.45
ChkaO54804 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ChkaO54804 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.26□□□□□ -0.45
ChkaO54804 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ChkaO54804 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.26□□□□□ -0.45
ChkaO54804 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.26□□□□□ -0.45
ChkaO54804 Gm28882-201ENSMUST00000185504 314 ntBASIC12.26□□□□□ -0.45
ChkaO54804 Gm5370-201ENSMUST00000187187 574 ntBASIC12.26□□□□□ -0.45
ChkaO54804 Gm9136-201ENSMUST00000193368 454 ntBASIC12.26□□□□□ -0.45
ChkaO54804 Gm18054-201ENSMUST00000207539 555 ntBASIC12.26□□□□□ -0.45
ChkaO54804 Gm18062-201ENSMUST00000208020 547 ntBASIC12.26□□□□□ -0.45
ChkaO54804 Gm18055-201ENSMUST00000208254 547 ntBASIC12.26□□□□□ -0.45
ChkaO54804 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.26□□□□□ -0.45
ChkaO54804 Gm5186-201ENSMUST00000218781 920 ntBASIC12.26□□□□□ -0.45
ChkaO54804 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms