Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Efnb3O35393 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
Efnb3O35393 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Efnb3O35393 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Efnb3O35393 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Efnb3O35393 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Efnb3O35393 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Efnb3O35393 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Efnb3O35393 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Efnb3O35393 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Efnb3O35393 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Efnb3O35393 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC9.6□□□□□ -0.87
Efnb3O35393 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Efnb3O35393 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Efnb3O35393 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Efnb3O35393 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC9.6□□□□□ -0.87
Efnb3O35393 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC9.6□□□□□ -0.87
Efnb3O35393 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Efnb3O35393 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Efnb3O35393 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Efnb3O35393 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Efnb3O35393 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Efnb3O35393 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC9.6□□□□□ -0.87
Efnb3O35393 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC9.6□□□□□ -0.87
Efnb3O35393 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC9.6□□□□□ -0.87
Efnb3O35393 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Efnb3O35393 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC9.6□□□□□ -0.87
Efnb3O35393 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Efnb3O35393 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Efnb3O35393 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC9.6□□□□□ -0.87
Efnb3O35393 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC9.6□□□□□ -0.87
Efnb3O35393 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Efnb3O35393 Gm9124-201ENSMUST00000191789 1092 ntBASIC9.6□□□□□ -0.87
Efnb3O35393 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Efnb3O35393 Gm9113-201ENSMUST00000192510 1018 ntBASIC9.6□□□□□ -0.87
Efnb3O35393 Gm9131-201ENSMUST00000193557 1089 ntBASIC9.6□□□□□ -0.87
Efnb3O35393 Gm9121-201ENSMUST00000193749 1071 ntBASIC9.6□□□□□ -0.87
Efnb3O35393 Gm38092-201ENSMUST00000195600 653 ntBASIC9.6□□□□□ -0.87
Efnb3O35393 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Efnb3O35393 Gm44799-201ENSMUST00000207639 1202 ntBASIC9.6□□□□□ -0.87
Efnb3O35393 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC9.6□□□□□ -0.87
Efnb3O35393 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC9.6□□□□□ -0.87
Efnb3O35393 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Efnb3O35393 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Efnb3O35393 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Efnb3O35393 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Efnb3O35393 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Efnb3O35393 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Efnb3O35393 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Efnb3O35393 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Efnb3O35393 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Efnb3O35393 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC9.6□□□□□ -0.87
Efnb3O35393 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Efnb3O35393 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Efnb3O35393 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Efnb3O35393 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Efnb3O35393 Gm43760-201ENSMUST00000202120 3015 ntBASIC9.6□□□□□ -0.87
Efnb3O35393 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Efnb3O35393 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Efnb3O35393 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Efnb3O35393 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Efnb3O35393 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Efnb3O35393 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Efnb3O35393 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Efnb3O35393 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Efnb3O35393 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Efnb3O35393 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Efnb3O35393 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC9.59□□□□□ -0.87
Efnb3O35393 Gm11964-201ENSMUST00000120982 444 ntBASIC9.59□□□□□ -0.87
Efnb3O35393 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Efnb3O35393 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Efnb3O35393 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC9.59□□□□□ -0.87
Efnb3O35393 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC9.59□□□□□ -0.87
Efnb3O35393 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC9.59□□□□□ -0.87
Efnb3O35393 Gm37497-201ENSMUST00000195830 798 ntBASIC9.59□□□□□ -0.87
Efnb3O35393 Gm18187-201ENSMUST00000196476 984 ntBASIC9.59□□□□□ -0.87
Efnb3O35393 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC9.59□□□□□ -0.87
Efnb3O35393 AC153974.2-201ENSMUST00000218577 1025 ntBASIC9.59□□□□□ -0.87
Efnb3O35393 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Efnb3O35393 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Efnb3O35393 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Efnb3O35393 Gm10012-201ENSMUST00000078252 192 ntBASIC9.59□□□□□ -0.87
Efnb3O35393 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Efnb3O35393 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Efnb3O35393 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC9.59□□□□□ -0.87
Efnb3O35393 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Efnb3O35393 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Efnb3O35393 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Efnb3O35393 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Efnb3O35393 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Efnb3O35393 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC9.59□□□□□ -0.87
Efnb3O35393 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Efnb3O35393 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Efnb3O35393 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Efnb3O35393 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Efnb3O35393 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Efnb3O35393 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Efnb3O35393 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC9.59□□□□□ -0.87
Efnb3O35393 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Efnb3O35393 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms