Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Gm4862-201ENSMUST00000170405 438 ntBASIC18.35■□□□□ 0.53
Polr1aO35134 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC18.35■□□□□ 0.53
Polr1aO35134 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC18.35■□□□□ 0.53
Polr1aO35134 Gm43380-201ENSMUST00000200421 220 ntBASIC18.35■□□□□ 0.53
Polr1aO35134 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Polr1aO35134 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC18.35■□□□□ 0.53
Polr1aO35134 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC18.35■□□□□ 0.53
Polr1aO35134 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Polr1aO35134 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Polr1aO35134 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Polr1aO35134 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Polr1aO35134 Gm21759-201ENSMUST00000178345 1828 ntBASIC18.35■□□□□ 0.53
Polr1aO35134 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Polr1aO35134 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Polr1aO35134 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Polr1aO35134 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Polr1aO35134 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Polr1aO35134 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Polr1aO35134 Gm9673-201ENSMUST00000119287 781 ntBASIC18.35■□□□□ 0.53
Polr1aO35134 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC18.35■□□□□ 0.53
Polr1aO35134 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC18.35■□□□□ 0.53
Polr1aO35134 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Polr1aO35134 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Polr1aO35134 Adra1a-206ENSMUST00000225182 2337 ntBASIC18.35■□□□□ 0.53
Polr1aO35134 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Polr1aO35134 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Polr1aO35134 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Polr1aO35134 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
Polr1aO35134 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Polr1aO35134 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Polr1aO35134 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Polr1aO35134 Gm13351-201ENSMUST00000118087 414 ntBASIC18.34■□□□□ 0.53
Polr1aO35134 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Polr1aO35134 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Polr1aO35134 Gm8723-201ENSMUST00000166076 820 ntBASIC18.34■□□□□ 0.53
Polr1aO35134 Gm8701-201ENSMUST00000169259 874 ntBASIC18.34■□□□□ 0.53
Polr1aO35134 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC18.34■□□□□ 0.53
Polr1aO35134 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Polr1aO35134 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Polr1aO35134 Gm7082-201ENSMUST00000209880 969 ntBASIC18.34■□□□□ 0.53
Polr1aO35134 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC18.34■□□□□ 0.53
Polr1aO35134 CT573086.4-201ENSMUST00000226729 342 ntBASIC18.34■□□□□ 0.53
Polr1aO35134 Gm4604-201ENSMUST00000025040 390 ntBASIC18.34■□□□□ 0.53
Polr1aO35134 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Polr1aO35134 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC18.34■□□□□ 0.53
Polr1aO35134 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Polr1aO35134 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC18.34■□□□□ 0.53
Polr1aO35134 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Polr1aO35134 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Polr1aO35134 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Polr1aO35134 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Polr1aO35134 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Polr1aO35134 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Polr1aO35134 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC18.33■□□□□ 0.53
Polr1aO35134 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Polr1aO35134 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Polr1aO35134 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Polr1aO35134 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.53
Polr1aO35134 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.53
Polr1aO35134 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Polr1aO35134 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC18.33■□□□□ 0.52
Polr1aO35134 Gm9135-201ENSMUST00000182963 990 ntBASIC18.33■□□□□ 0.52
Polr1aO35134 AC156501.1-201ENSMUST00000228219 270 ntBASIC18.33■□□□□ 0.52
Polr1aO35134 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Polr1aO35134 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Polr1aO35134 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Polr1aO35134 Gm45779-201ENSMUST00000212189 4064 ntBASIC18.33■□□□□ 0.52
Polr1aO35134 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Polr1aO35134 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Polr1aO35134 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Polr1aO35134 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Polr1aO35134 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Polr1aO35134 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.52
Polr1aO35134 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC18.33■□□□□ 0.52
Polr1aO35134 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Polr1aO35134 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Polr1aO35134 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Polr1aO35134 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Polr1aO35134 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Polr1aO35134 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Polr1aO35134 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC18.32■□□□□ 0.52
Polr1aO35134 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Polr1aO35134 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC18.32■□□□□ 0.52
Polr1aO35134 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Polr1aO35134 Gm23694-201ENSMUST00000179335 110 ntBASIC18.32■□□□□ 0.52
Polr1aO35134 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Polr1aO35134 Gm17889-201ENSMUST00000198410 598 ntBASIC18.32■□□□□ 0.52
Polr1aO35134 Gm45758-201ENSMUST00000212448 1006 ntBASIC18.32■□□□□ 0.52
Polr1aO35134 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Polr1aO35134 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC18.32■□□□□ 0.52
Polr1aO35134 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Polr1aO35134 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Polr1aO35134 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Polr1aO35134 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Polr1aO35134 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Polr1aO35134 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC18.32■□□□□ 0.52
Polr1aO35134 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Polr1aO35134 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Polr1aO35134 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Polr1aO35134 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms