Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.66□□□□□ -0.38
Ebf3O08791 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ebf3O08791 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.66□□□□□ -0.38
Ebf3O08791 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC12.66□□□□□ -0.38
Ebf3O08791 Gm9211-201ENSMUST00000182882 975 ntBASIC12.66□□□□□ -0.38
Ebf3O08791 Gm9555-201ENSMUST00000200908 583 ntBASIC12.66□□□□□ -0.38
Ebf3O08791 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC12.66□□□□□ -0.38
Ebf3O08791 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC12.66□□□□□ -0.38
Ebf3O08791 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.66□□□□□ -0.38
Ebf3O08791 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.66□□□□□ -0.38
Ebf3O08791 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ebf3O08791 Gm9996-201ENSMUST00000070359 913 ntBASIC12.66□□□□□ -0.38
Ebf3O08791 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ebf3O08791 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ebf3O08791 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ebf3O08791 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ebf3O08791 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ebf3O08791 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ebf3O08791 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ebf3O08791 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ebf3O08791 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ebf3O08791 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ebf3O08791 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ebf3O08791 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ebf3O08791 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Ebf3O08791 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.65□□□□□ -0.38
Ebf3O08791 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ebf3O08791 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ebf3O08791 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ebf3O08791 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ebf3O08791 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.65□□□□□ -0.38
Ebf3O08791 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.65□□□□□ -0.38
Ebf3O08791 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Ebf3O08791 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ebf3O08791 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ebf3O08791 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Ebf3O08791 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Ebf3O08791 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Ebf3O08791 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.65□□□□□ -0.38
Ebf3O08791 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.65□□□□□ -0.38
Ebf3O08791 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.65□□□□□ -0.38
Ebf3O08791 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.65□□□□□ -0.38
Ebf3O08791 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.65□□□□□ -0.38
Ebf3O08791 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC12.65□□□□□ -0.38
Ebf3O08791 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC12.65□□□□□ -0.38
Ebf3O08791 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.65□□□□□ -0.38
Ebf3O08791 Gm9550-201ENSMUST00000161130 862 ntBASIC12.65□□□□□ -0.38
Ebf3O08791 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.65□□□□□ -0.38
Ebf3O08791 Gm5616-201ENSMUST00000165252 384 ntBASIC12.65□□□□□ -0.38
Ebf3O08791 Gm8741-201ENSMUST00000174736 384 ntBASIC12.65□□□□□ -0.38
Ebf3O08791 Gm3508-201ENSMUST00000186012 792 ntBASIC12.65□□□□□ -0.38
Ebf3O08791 Gm18304-201ENSMUST00000189162 546 ntBASIC12.65□□□□□ -0.38
Ebf3O08791 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ebf3O08791 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.65□□□□□ -0.38
Ebf3O08791 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.65□□□□□ -0.38
Ebf3O08791 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Ebf3O08791 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.65□□□□□ -0.38
Ebf3O08791 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ebf3O08791 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ebf3O08791 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ebf3O08791 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Ebf3O08791 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ebf3O08791 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ebf3O08791 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.65□□□□□ -0.38
Ebf3O08791 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Ebf3O08791 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ebf3O08791 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Ebf3O08791 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.39
Ebf3O08791 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Ebf3O08791 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf3O08791 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf3O08791 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf3O08791 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf3O08791 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.64□□□□□ -0.39
Ebf3O08791 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.64□□□□□ -0.39
Ebf3O08791 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf3O08791 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Ebf3O08791 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf3O08791 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Ebf3O08791 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.64□□□□□ -0.39
Ebf3O08791 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf3O08791 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
Ebf3O08791 Gm18556-201ENSMUST00000219748 1031 ntBASIC12.64□□□□□ -0.39
Ebf3O08791 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ebf3O08791 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf3O08791 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf3O08791 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ebf3O08791 Gm43081-201ENSMUST00000199082 1380 ntBASIC12.64□□□□□ -0.39
Ebf3O08791 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf3O08791 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf3O08791 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Ebf3O08791 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf3O08791 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf3O08791 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf3O08791 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf3O08791 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf3O08791 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf3O08791 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ebf3O08791 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.64□□□□□ -0.39
Ebf3O08791 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms