Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC14.22□□□□□ -0.13
Tcof1O08784 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tcof1O08784 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tcof1O08784 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tcof1O08784 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tcof1O08784 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tcof1O08784 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tcof1O08784 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC14.21□□□□□ -0.13
Tcof1O08784 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tcof1O08784 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC14.21□□□□□ -0.13
Tcof1O08784 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tcof1O08784 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Tcof1O08784 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC14.21□□□□□ -0.13
Tcof1O08784 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC14.21□□□□□ -0.13
Tcof1O08784 Gm29615-201ENSMUST00000185371 697 ntBASIC14.21□□□□□ -0.13
Tcof1O08784 Gm28224-201ENSMUST00000186078 697 ntBASIC14.21□□□□□ -0.13
Tcof1O08784 Gm29001-201ENSMUST00000186177 697 ntBASIC14.21□□□□□ -0.13
Tcof1O08784 Gm28292-201ENSMUST00000186593 697 ntBASIC14.21□□□□□ -0.13
Tcof1O08784 Gm28101-201ENSMUST00000187608 697 ntBASIC14.21□□□□□ -0.13
Tcof1O08784 Gm29076-201ENSMUST00000187689 697 ntBASIC14.21□□□□□ -0.13
Tcof1O08784 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC14.21□□□□□ -0.13
Tcof1O08784 Gm28302-201ENSMUST00000187931 697 ntBASIC14.21□□□□□ -0.13
Tcof1O08784 Gm28646-201ENSMUST00000188220 697 ntBASIC14.21□□□□□ -0.13
Tcof1O08784 Gm28205-201ENSMUST00000189177 697 ntBASIC14.21□□□□□ -0.13
Tcof1O08784 Gm29032-201ENSMUST00000189797 697 ntBASIC14.21□□□□□ -0.13
Tcof1O08784 Gm28695-201ENSMUST00000190300 697 ntBASIC14.21□□□□□ -0.13
Tcof1O08784 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tcof1O08784 Gm37448-201ENSMUST00000192795 697 ntBASIC14.21□□□□□ -0.13
Tcof1O08784 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Tcof1O08784 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tcof1O08784 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC14.21□□□□□ -0.13
Tcof1O08784 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tcof1O08784 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tcof1O08784 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tcof1O08784 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC14.21□□□□□ -0.13
Tcof1O08784 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tcof1O08784 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tcof1O08784 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Tcof1O08784 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC14.21□□□□□ -0.13
Tcof1O08784 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Tcof1O08784 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tcof1O08784 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tcof1O08784 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tcof1O08784 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tcof1O08784 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tcof1O08784 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tcof1O08784 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC14.21□□□□□ -0.13
Tcof1O08784 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tcof1O08784 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
Tcof1O08784 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Tcof1O08784 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
Tcof1O08784 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Tcof1O08784 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Tcof1O08784 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tcof1O08784 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC14.21□□□□□ -0.14
Tcof1O08784 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
Tcof1O08784 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tcof1O08784 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tcof1O08784 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tcof1O08784 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tcof1O08784 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tcof1O08784 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tcof1O08784 Gm23912-201ENSMUST00000104687 87 ntBASIC14.2□□□□□ -0.14
Tcof1O08784 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Tcof1O08784 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
Tcof1O08784 Gm15711-201ENSMUST00000118889 535 ntBASIC14.2□□□□□ -0.14
Tcof1O08784 Gm16481-201ENSMUST00000119074 1227 ntBASIC14.2□□□□□ -0.14
Tcof1O08784 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tcof1O08784 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC14.2□□□□□ -0.14
Tcof1O08784 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tcof1O08784 Gm27552-201ENSMUST00000183351 62 ntBASIC14.2□□□□□ -0.14
Tcof1O08784 Gm27844-201ENSMUST00000183613 62 ntBASIC14.2□□□□□ -0.14
Tcof1O08784 Gm27627-201ENSMUST00000183644 150 ntBASIC14.2□□□□□ -0.14
Tcof1O08784 Gm42599-201ENSMUST00000201308 469 ntBASIC14.2□□□□□ -0.14
Tcof1O08784 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC14.2□□□□□ -0.14
Tcof1O08784 Olfr1347-205ENSMUST00000220413 964 ntBASIC14.2□□□□□ -0.14
Tcof1O08784 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tcof1O08784 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Tcof1O08784 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tcof1O08784 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tcof1O08784 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tcof1O08784 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tcof1O08784 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tcof1O08784 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC14.2□□□□□ -0.14
Tcof1O08784 Gm44806-201ENSMUST00000205574 2303 ntBASIC14.2□□□□□ -0.14
Tcof1O08784 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tcof1O08784 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Tcof1O08784 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Tcof1O08784 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Tcof1O08784 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tcof1O08784 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Tcof1O08784 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tcof1O08784 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Tcof1O08784 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tcof1O08784 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tcof1O08784 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tcof1O08784 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tcof1O08784 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14.19□□□□□ -0.14
Tcof1O08784 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tcof1O08784 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 121.8 ms