Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6F6VAN0 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6F6VAN0 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6F6VAN0 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.49□□□□□ -0.41
Atf6F6VAN0 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.49□□□□□ -0.41
Atf6F6VAN0 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.49□□□□□ -0.41
Atf6F6VAN0 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.49□□□□□ -0.41
Atf6F6VAN0 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6F6VAN0 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.49□□□□□ -0.41
Atf6F6VAN0 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6F6VAN0 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.49□□□□□ -0.41
Atf6F6VAN0 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.49□□□□□ -0.41
Atf6F6VAN0 Gm7399-201ENSMUST00000032395 858 ntBASIC12.49□□□□□ -0.41
Atf6F6VAN0 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6F6VAN0 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Atf6F6VAN0 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.49□□□□□ -0.41
Atf6F6VAN0 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.49□□□□□ -0.41
Atf6F6VAN0 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6F6VAN0 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6F6VAN0 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Atf6F6VAN0 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6F6VAN0 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6F6VAN0 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Atf6F6VAN0 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6F6VAN0 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Atf6F6VAN0 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.49□□□□□ -0.41
Atf6F6VAN0 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Atf6F6VAN0 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Atf6F6VAN0 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atf6F6VAN0 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.48□□□□□ -0.41
Atf6F6VAN0 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atf6F6VAN0 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Atf6F6VAN0 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Atf6F6VAN0 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atf6F6VAN0 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atf6F6VAN0 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Atf6F6VAN0 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Atf6F6VAN0 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atf6F6VAN0 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Atf6F6VAN0 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atf6F6VAN0 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Atf6F6VAN0 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Atf6F6VAN0 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Atf6F6VAN0 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Atf6F6VAN0 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Atf6F6VAN0 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atf6F6VAN0 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atf6F6VAN0 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atf6F6VAN0 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.48□□□□□ -0.41
Atf6F6VAN0 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.48□□□□□ -0.41
Atf6F6VAN0 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Atf6F6VAN0 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Atf6F6VAN0 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Atf6F6VAN0 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Atf6F6VAN0 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Atf6F6VAN0 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Atf6F6VAN0 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Atf6F6VAN0 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Atf6F6VAN0 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.48□□□□□ -0.41
Atf6F6VAN0 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Atf6F6VAN0 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atf6F6VAN0 Gm26956-201ENSMUST00000182176 986 ntBASIC12.48□□□□□ -0.41
Atf6F6VAN0 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.48□□□□□ -0.41
Atf6F6VAN0 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Atf6F6VAN0 Gm30285-201ENSMUST00000214614 422 ntBASIC12.48□□□□□ -0.41
Atf6F6VAN0 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atf6F6VAN0 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atf6F6VAN0 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atf6F6VAN0 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.48□□□□□ -0.41
Atf6F6VAN0 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Atf6F6VAN0 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atf6F6VAN0 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atf6F6VAN0 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Atf6F6VAN0 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Atf6F6VAN0 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atf6F6VAN0 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Atf6F6VAN0 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atf6F6VAN0 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atf6F6VAN0 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atf6F6VAN0 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atf6F6VAN0 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atf6F6VAN0 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Atf6F6VAN0 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atf6F6VAN0 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atf6F6VAN0 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atf6F6VAN0 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atf6F6VAN0 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Atf6F6VAN0 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.47□□□□□ -0.41
Atf6F6VAN0 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atf6F6VAN0 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Atf6F6VAN0 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Atf6F6VAN0 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atf6F6VAN0 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Atf6F6VAN0 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Atf6F6VAN0 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atf6F6VAN0 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Atf6F6VAN0 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.47□□□□□ -0.41
Atf6F6VAN0 Gm23912-201ENSMUST00000104687 87 ntBASIC12.47□□□□□ -0.41
Atf6F6VAN0 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Atf6F6VAN0 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms