Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc149F6V035 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ccdc149F6V035 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.35□□□□□ -0.43
Ccdc149F6V035 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc149F6V035 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc149F6V035 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc149F6V035 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc149F6V035 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc149F6V035 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc149F6V035 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc149F6V035 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc149F6V035 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc149F6V035 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc149F6V035 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc149F6V035 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc149F6V035 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.35□□□□□ -0.43
Ccdc149F6V035 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ccdc149F6V035 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc149F6V035 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc149F6V035 Gm12857-201ENSMUST00000117678 592 ntBASIC12.35□□□□□ -0.43
Ccdc149F6V035 Gm14724-201ENSMUST00000118400 537 ntBASIC12.35□□□□□ -0.43
Ccdc149F6V035 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.35□□□□□ -0.43
Ccdc149F6V035 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.35□□□□□ -0.43
Ccdc149F6V035 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Ccdc149F6V035 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc149F6V035 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC12.35□□□□□ -0.43
Ccdc149F6V035 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Ccdc149F6V035 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc149F6V035 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc149F6V035 Gm8100-201ENSMUST00000182906 988 ntBASIC12.35□□□□□ -0.43
Ccdc149F6V035 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.35□□□□□ -0.43
Ccdc149F6V035 Gm2965-201ENSMUST00000198365 343 ntBASIC12.35□□□□□ -0.43
Ccdc149F6V035 Gm45118-201ENSMUST00000208928 825 ntBASIC12.35□□□□□ -0.43
Ccdc149F6V035 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc149F6V035 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.35□□□□□ -0.43
Ccdc149F6V035 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc149F6V035 Ntng1-201ENSMUST00000051253 327 ntBASIC12.35□□□□□ -0.43
Ccdc149F6V035 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc149F6V035 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Ccdc149F6V035 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc149F6V035 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc149F6V035 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ccdc149F6V035 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc149F6V035 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc149F6V035 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc149F6V035 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc149F6V035 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.35□□□□□ -0.43
Ccdc149F6V035 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc149F6V035 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc149F6V035 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc149F6V035 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc149F6V035 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc149F6V035 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc149F6V035 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc149F6V035 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc149F6V035 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc149F6V035 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc149F6V035 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc149F6V035 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc149F6V035 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Ccdc149F6V035 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc149F6V035 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ccdc149F6V035 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.34□□□□□ -0.43
Ccdc149F6V035 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc149F6V035 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc149F6V035 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc149F6V035 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Ccdc149F6V035 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.34□□□□□ -0.43
Ccdc149F6V035 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc149F6V035 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.34□□□□□ -0.43
Ccdc149F6V035 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.34□□□□□ -0.43
Ccdc149F6V035 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.34□□□□□ -0.43
Ccdc149F6V035 Gm23251-201ENSMUST00000103773 110 ntBASIC12.34□□□□□ -0.43
Ccdc149F6V035 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.34□□□□□ -0.43
Ccdc149F6V035 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc149F6V035 Gm12165-201ENSMUST00000117047 342 ntBASIC12.34□□□□□ -0.43
Ccdc149F6V035 Gm7851-201ENSMUST00000117574 323 ntBASIC12.34□□□□□ -0.43
Ccdc149F6V035 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.34□□□□□ -0.43
Ccdc149F6V035 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc149F6V035 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.34□□□□□ -0.43
Ccdc149F6V035 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.34□□□□□ -0.43
Ccdc149F6V035 Gm19353-201ENSMUST00000184561 445 ntBASIC12.34□□□□□ -0.43
Ccdc149F6V035 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.34□□□□□ -0.43
Ccdc149F6V035 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Ccdc149F6V035 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.34□□□□□ -0.43
Ccdc149F6V035 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc149F6V035 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc149F6V035 Gm10288-201ENSMUST00000084614 537 ntBASIC12.34□□□□□ -0.43
Ccdc149F6V035 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc149F6V035 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.34□□□□□ -0.43
Ccdc149F6V035 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc149F6V035 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc149F6V035 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc149F6V035 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc149F6V035 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Ccdc149F6V035 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc149F6V035 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc149F6V035 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc149F6V035 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc149F6V035 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms