Protein–RNA interactions for Protein: E9PUL3

Clca3b, Chloride channel accessory 3B, mousemouse

Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3bE9PUL3 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clca3bE9PUL3 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clca3bE9PUL3 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Clca3bE9PUL3 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clca3bE9PUL3 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clca3bE9PUL3 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Clca3bE9PUL3 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clca3bE9PUL3 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clca3bE9PUL3 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clca3bE9PUL3 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clca3bE9PUL3 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clca3bE9PUL3 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Clca3bE9PUL3 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Clca3bE9PUL3 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clca3bE9PUL3 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clca3bE9PUL3 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clca3bE9PUL3 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.06□□□□□ -0.32
Clca3bE9PUL3 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clca3bE9PUL3 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Clca3bE9PUL3 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clca3bE9PUL3 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Clca3bE9PUL3 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clca3bE9PUL3 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC13.05□□□□□ -0.32
Clca3bE9PUL3 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC13.05□□□□□ -0.32
Clca3bE9PUL3 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clca3bE9PUL3 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Clca3bE9PUL3 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.05□□□□□ -0.32
Clca3bE9PUL3 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clca3bE9PUL3 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clca3bE9PUL3 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clca3bE9PUL3 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC13.05□□□□□ -0.32
Clca3bE9PUL3 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clca3bE9PUL3 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Clca3bE9PUL3 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clca3bE9PUL3 Gm15515-201ENSMUST00000117827 822 ntBASIC13.05□□□□□ -0.32
Clca3bE9PUL3 Gm15004-201ENSMUST00000119192 630 ntBASIC13.05□□□□□ -0.32
Clca3bE9PUL3 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Clca3bE9PUL3 Mir5120-201ENSMUST00000175020 78 ntBASIC13.05□□□□□ -0.32
Clca3bE9PUL3 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clca3bE9PUL3 Ighv4-2-201ENSMUST00000192975 362 ntBASIC13.05□□□□□ -0.32
Clca3bE9PUL3 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Clca3bE9PUL3 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC13.05□□□□□ -0.32
Clca3bE9PUL3 Mettl6-204ENSMUST00000227595 1027 ntBASIC13.05□□□□□ -0.32
Clca3bE9PUL3 AC121960.1-201ENSMUST00000227982 564 ntBASIC13.05□□□□□ -0.32
Clca3bE9PUL3 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clca3bE9PUL3 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clca3bE9PUL3 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clca3bE9PUL3 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Clca3bE9PUL3 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Clca3bE9PUL3 Gm13812-201ENSMUST00000118061 1347 ntBASIC13.05□□□□□ -0.32
Clca3bE9PUL3 Gm13810-201ENSMUST00000118584 1347 ntBASIC13.05□□□□□ -0.32
Clca3bE9PUL3 Gm9796-201ENSMUST00000062249 2250 ntBASIC13.05□□□□□ -0.32
Clca3bE9PUL3 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clca3bE9PUL3 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC13.05□□□□□ -0.32
Clca3bE9PUL3 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Clca3bE9PUL3 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clca3bE9PUL3 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clca3bE9PUL3 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clca3bE9PUL3 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clca3bE9PUL3 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clca3bE9PUL3 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Clca3bE9PUL3 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clca3bE9PUL3 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clca3bE9PUL3 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clca3bE9PUL3 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Clca3bE9PUL3 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Clca3bE9PUL3 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clca3bE9PUL3 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clca3bE9PUL3 Gm9072-201ENSMUST00000218390 1514 ntBASIC13.04□□□□□ -0.32
Clca3bE9PUL3 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clca3bE9PUL3 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clca3bE9PUL3 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clca3bE9PUL3 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Clca3bE9PUL3 Gm8522-201ENSMUST00000118416 1929 ntBASIC13.04□□□□□ -0.32
Clca3bE9PUL3 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Clca3bE9PUL3 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clca3bE9PUL3 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clca3bE9PUL3 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Clca3bE9PUL3 Gm23596-201ENSMUST00000104304 132 ntBASIC13.04□□□□□ -0.32
Clca3bE9PUL3 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Clca3bE9PUL3 Gm15172-201ENSMUST00000118945 1046 ntBASIC13.04□□□□□ -0.32
Clca3bE9PUL3 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Clca3bE9PUL3 Gm16570-201ENSMUST00000161951 436 ntBASIC13.04□□□□□ -0.32
Clca3bE9PUL3 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Clca3bE9PUL3 Gm42629-201ENSMUST00000199063 1102 ntBASIC13.04□□□□□ -0.32
Clca3bE9PUL3 AC155637.1-201ENSMUST00000218560 636 ntBASIC13.04□□□□□ -0.32
Clca3bE9PUL3 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clca3bE9PUL3 Gm5705-201ENSMUST00000066241 711 ntBASIC13.04□□□□□ -0.32
Clca3bE9PUL3 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clca3bE9PUL3 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clca3bE9PUL3 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clca3bE9PUL3 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clca3bE9PUL3 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clca3bE9PUL3 Gm44152-201ENSMUST00000205007 1691 ntBASIC13.04□□□□□ -0.32
Clca3bE9PUL3 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clca3bE9PUL3 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clca3bE9PUL3 AC173482.6-201ENSMUST00000225889 1741 ntBASIC13.04□□□□□ -0.32
Clca3bE9PUL3 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clca3bE9PUL3 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clca3bE9PUL3 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 144.5 ms