Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Ccdc112A0AUP1 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc112A0AUP1 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.87□□□□□ -0.19
Ccdc112A0AUP1 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.87□□□□□ -0.19
Ccdc112A0AUP1 Gm18782-201ENSMUST00000209023 1399 ntBASIC13.87□□□□□ -0.19
Ccdc112A0AUP1 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Ccdc112A0AUP1 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc112A0AUP1 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc112A0AUP1 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Ccdc112A0AUP1 Gm27731-201ENSMUST00000185192 107 ntBASIC13.87□□□□□ -0.19
Ccdc112A0AUP1 Gm42693-201ENSMUST00000196779 631 ntBASIC13.87□□□□□ -0.19
Ccdc112A0AUP1 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Ccdc112A0AUP1 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc112A0AUP1 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc112A0AUP1 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc112A0AUP1 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.87□□□□□ -0.19
Ccdc112A0AUP1 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC13.87□□□□□ -0.19
Ccdc112A0AUP1 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc112A0AUP1 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc112A0AUP1 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc112A0AUP1 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc112A0AUP1 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
Ccdc112A0AUP1 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc112A0AUP1 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc112A0AUP1 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ccdc112A0AUP1 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc112A0AUP1 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc112A0AUP1 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc112A0AUP1 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.86□□□□□ -0.19
Ccdc112A0AUP1 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.86□□□□□ -0.19
Ccdc112A0AUP1 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc112A0AUP1 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc112A0AUP1 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc112A0AUP1 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc112A0AUP1 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc112A0AUP1 Gm13875-201ENSMUST00000120162 282 ntBASIC13.86□□□□□ -0.19
Ccdc112A0AUP1 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc112A0AUP1 Gm13316-201ENSMUST00000140537 691 ntBASIC13.86□□□□□ -0.19
Ccdc112A0AUP1 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Ccdc112A0AUP1 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC13.86□□□□□ -0.19
Ccdc112A0AUP1 Gm8602-201ENSMUST00000184045 607 ntBASIC13.86□□□□□ -0.19
Ccdc112A0AUP1 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.86□□□□□ -0.19
Ccdc112A0AUP1 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc112A0AUP1 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13.86□□□□□ -0.19
Ccdc112A0AUP1 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.86□□□□□ -0.19
Ccdc112A0AUP1 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc112A0AUP1 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Ccdc112A0AUP1 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc112A0AUP1 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc112A0AUP1 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc112A0AUP1 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Ccdc112A0AUP1 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ccdc112A0AUP1 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc112A0AUP1 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC13.86□□□□□ -0.19
Ccdc112A0AUP1 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Ccdc112A0AUP1 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc112A0AUP1 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc112A0AUP1 Gm6189-201ENSMUST00000164487 2082 ntBASIC13.86□□□□□ -0.19
Ccdc112A0AUP1 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc112A0AUP1 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc112A0AUP1 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc112A0AUP1 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc112A0AUP1 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Ccdc112A0AUP1 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc112A0AUP1 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc112A0AUP1 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Ccdc112A0AUP1 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Ccdc112A0AUP1 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC13.85□□□□□ -0.19
Ccdc112A0AUP1 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc112A0AUP1 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc112A0AUP1 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc112A0AUP1 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc112A0AUP1 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc112A0AUP1 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Ccdc112A0AUP1 Gm15172-201ENSMUST00000118945 1046 ntBASIC13.85□□□□□ -0.19
Ccdc112A0AUP1 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.85□□□□□ -0.19
Ccdc112A0AUP1 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Ccdc112A0AUP1 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.85□□□□□ -0.19
Ccdc112A0AUP1 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.85□□□□□ -0.19
Ccdc112A0AUP1 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc112A0AUP1 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.85□□□□□ -0.19
Ccdc112A0AUP1 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.85□□□□□ -0.19
Ccdc112A0AUP1 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc112A0AUP1 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc112A0AUP1 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc112A0AUP1 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Ccdc112A0AUP1 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc112A0AUP1 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Ccdc112A0AUP1 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc112A0AUP1 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Ccdc112A0AUP1 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc112A0AUP1 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Ccdc112A0AUP1 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Ccdc112A0AUP1 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Ccdc112A0AUP1 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Ccdc112A0AUP1 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc112A0AUP1 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc112A0AUP1 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Ccdc112A0AUP1 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC13.85□□□□□ -0.19
Ccdc112A0AUP1 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms