Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cfap99A0A140LIX9 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Cfap99A0A140LIX9 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cfap99A0A140LIX9 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cfap99A0A140LIX9 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Cfap99A0A140LIX9 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Cfap99A0A140LIX9 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Cfap99A0A140LIX9 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cfap99A0A140LIX9 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cfap99A0A140LIX9 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cfap99A0A140LIX9 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cfap99A0A140LIX9 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cfap99A0A140LIX9 CT009757.3-201ENSMUST00000223367 2320 ntBASIC14.55□□□□□ -0.08
Cfap99A0A140LIX9 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cfap99A0A140LIX9 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cfap99A0A140LIX9 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cfap99A0A140LIX9 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cfap99A0A140LIX9 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
Cfap99A0A140LIX9 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cfap99A0A140LIX9 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cfap99A0A140LIX9 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cfap99A0A140LIX9 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cfap99A0A140LIX9 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cfap99A0A140LIX9 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cfap99A0A140LIX9 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Cfap99A0A140LIX9 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cfap99A0A140LIX9 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cfap99A0A140LIX9 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cfap99A0A140LIX9 Gm14760-201ENSMUST00000121831 999 ntBASIC14.55□□□□□ -0.08
Cfap99A0A140LIX9 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cfap99A0A140LIX9 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Cfap99A0A140LIX9 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
Cfap99A0A140LIX9 Gm7467-201ENSMUST00000185173 652 ntBASIC14.55□□□□□ -0.08
Cfap99A0A140LIX9 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cfap99A0A140LIX9 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC14.55□□□□□ -0.08
Cfap99A0A140LIX9 Gm10702-201ENSMUST00000098929 1268 ntBASIC14.55□□□□□ -0.08
Cfap99A0A140LIX9 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cfap99A0A140LIX9 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cfap99A0A140LIX9 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cfap99A0A140LIX9 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cfap99A0A140LIX9 Gm18227-201ENSMUST00000211082 1468 ntBASIC14.55□□□□□ -0.08
Cfap99A0A140LIX9 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cfap99A0A140LIX9 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cfap99A0A140LIX9 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cfap99A0A140LIX9 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Cfap99A0A140LIX9 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cfap99A0A140LIX9 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cfap99A0A140LIX9 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Cfap99A0A140LIX9 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.54□□□□□ -0.08
Cfap99A0A140LIX9 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cfap99A0A140LIX9 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cfap99A0A140LIX9 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Cfap99A0A140LIX9 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cfap99A0A140LIX9 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Cfap99A0A140LIX9 Gm14644-201ENSMUST00000116671 647 ntBASIC14.54□□□□□ -0.08
Cfap99A0A140LIX9 Gm13315-201ENSMUST00000120376 991 ntBASIC14.54□□□□□ -0.08
Cfap99A0A140LIX9 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC14.54□□□□□ -0.08
Cfap99A0A140LIX9 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC14.54□□□□□ -0.08
Cfap99A0A140LIX9 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC14.54□□□□□ -0.08
Cfap99A0A140LIX9 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC14.54□□□□□ -0.08
Cfap99A0A140LIX9 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cfap99A0A140LIX9 Gm5732-201ENSMUST00000182596 1007 ntBASIC14.54□□□□□ -0.08
Cfap99A0A140LIX9 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
Cfap99A0A140LIX9 Mir7032-201ENSMUST00000185154 79 ntBASIC14.54□□□□□ -0.08
Cfap99A0A140LIX9 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cfap99A0A140LIX9 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC14.54□□□□□ -0.08
Cfap99A0A140LIX9 Gm39404-201ENSMUST00000216350 313 ntBASIC14.54□□□□□ -0.08
Cfap99A0A140LIX9 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
Cfap99A0A140LIX9 AC125209.1-201ENSMUST00000225812 766 ntBASIC14.54□□□□□ -0.08
Cfap99A0A140LIX9 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cfap99A0A140LIX9 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC14.54□□□□□ -0.08
Cfap99A0A140LIX9 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cfap99A0A140LIX9 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cfap99A0A140LIX9 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cfap99A0A140LIX9 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cfap99A0A140LIX9 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cfap99A0A140LIX9 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cfap99A0A140LIX9 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC14.54□□□□□ -0.08
Cfap99A0A140LIX9 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Cfap99A0A140LIX9 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cfap99A0A140LIX9 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.54□□□□□ -0.08
Cfap99A0A140LIX9 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cfap99A0A140LIX9 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.54□□□□□ -0.08
Cfap99A0A140LIX9 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cfap99A0A140LIX9 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cfap99A0A140LIX9 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cfap99A0A140LIX9 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Cfap99A0A140LIX9 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cfap99A0A140LIX9 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cfap99A0A140LIX9 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cfap99A0A140LIX9 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cfap99A0A140LIX9 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cfap99A0A140LIX9 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cfap99A0A140LIX9 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cfap99A0A140LIX9 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cfap99A0A140LIX9 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cfap99A0A140LIX9 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cfap99A0A140LIX9 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cfap99A0A140LIX9 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cfap99A0A140LIX9 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms