Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc194A0A140LIT1 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc194A0A140LIT1 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ccdc194A0A140LIT1 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Ccdc194A0A140LIT1 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc194A0A140LIT1 Gm12058-201ENSMUST00000118614 437 ntBASIC12.09□□□□□ -0.47
Ccdc194A0A140LIT1 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.09□□□□□ -0.47
Ccdc194A0A140LIT1 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.09□□□□□ -0.47
Ccdc194A0A140LIT1 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.09□□□□□ -0.47
Ccdc194A0A140LIT1 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc194A0A140LIT1 Gm25261-201ENSMUST00000157416 134 ntBASIC12.09□□□□□ -0.47
Ccdc194A0A140LIT1 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Ccdc194A0A140LIT1 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc194A0A140LIT1 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc194A0A140LIT1 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc194A0A140LIT1 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc194A0A140LIT1 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc194A0A140LIT1 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Ccdc194A0A140LIT1 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Ccdc194A0A140LIT1 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc194A0A140LIT1 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.09□□□□□ -0.47
Ccdc194A0A140LIT1 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc194A0A140LIT1 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc194A0A140LIT1 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc194A0A140LIT1 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.09□□□□□ -0.47
Ccdc194A0A140LIT1 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc194A0A140LIT1 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc194A0A140LIT1 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc194A0A140LIT1 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc194A0A140LIT1 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc194A0A140LIT1 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.09□□□□□ -0.47
Ccdc194A0A140LIT1 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc194A0A140LIT1 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.09□□□□□ -0.47
Ccdc194A0A140LIT1 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.09□□□□□ -0.47
Ccdc194A0A140LIT1 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Ccdc194A0A140LIT1 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ccdc194A0A140LIT1 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.08□□□□□ -0.47
Ccdc194A0A140LIT1 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.08□□□□□ -0.47
Ccdc194A0A140LIT1 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.47
Ccdc194A0A140LIT1 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ccdc194A0A140LIT1 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ccdc194A0A140LIT1 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Ccdc194A0A140LIT1 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc194A0A140LIT1 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc194A0A140LIT1 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ccdc194A0A140LIT1 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc194A0A140LIT1 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Ccdc194A0A140LIT1 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc194A0A140LIT1 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.08□□□□□ -0.48
Ccdc194A0A140LIT1 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc194A0A140LIT1 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Ccdc194A0A140LIT1 Gm24934-201ENSMUST00000103764 111 ntBASIC12.08□□□□□ -0.48
Ccdc194A0A140LIT1 Gm23912-201ENSMUST00000104687 87 ntBASIC12.08□□□□□ -0.48
Ccdc194A0A140LIT1 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc194A0A140LIT1 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.08□□□□□ -0.48
Ccdc194A0A140LIT1 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.08□□□□□ -0.48
Ccdc194A0A140LIT1 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc194A0A140LIT1 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc194A0A140LIT1 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc194A0A140LIT1 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc194A0A140LIT1 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.08□□□□□ -0.48
Ccdc194A0A140LIT1 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.08□□□□□ -0.48
Ccdc194A0A140LIT1 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc194A0A140LIT1 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc194A0A140LIT1 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc194A0A140LIT1 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Ccdc194A0A140LIT1 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc194A0A140LIT1 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc194A0A140LIT1 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc194A0A140LIT1 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc194A0A140LIT1 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc194A0A140LIT1 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc194A0A140LIT1 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc194A0A140LIT1 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc194A0A140LIT1 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc194A0A140LIT1 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc194A0A140LIT1 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc194A0A140LIT1 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc194A0A140LIT1 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc194A0A140LIT1 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc194A0A140LIT1 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc194A0A140LIT1 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc194A0A140LIT1 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc194A0A140LIT1 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc194A0A140LIT1 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc194A0A140LIT1 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc194A0A140LIT1 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc194A0A140LIT1 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc194A0A140LIT1 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc194A0A140LIT1 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc194A0A140LIT1 Gm10434-201ENSMUST00000101158 471 ntBASIC12.07□□□□□ -0.48
Ccdc194A0A140LIT1 Gm6023-201ENSMUST00000118217 606 ntBASIC12.07□□□□□ -0.48
Ccdc194A0A140LIT1 Gm14660-201ENSMUST00000119809 575 ntBASIC12.07□□□□□ -0.48
Ccdc194A0A140LIT1 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc194A0A140LIT1 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc194A0A140LIT1 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc194A0A140LIT1 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc194A0A140LIT1 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc194A0A140LIT1 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.07□□□□□ -0.48
Ccdc194A0A140LIT1 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms