Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trbv29A0A0G2LB96 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trbv29A0A0G2LB96 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Trbv29A0A0G2LB96 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
Trbv29A0A0G2LB96 Gm1335-201ENSMUST00000121653 386 ntBASIC10.08□□□□□ -0.8
Trbv29A0A0G2LB96 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
Trbv29A0A0G2LB96 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Trbv29A0A0G2LB96 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trbv29A0A0G2LB96 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trbv29A0A0G2LB96 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trbv29A0A0G2LB96 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC10.08□□□□□ -0.8
Trbv29A0A0G2LB96 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC10.08□□□□□ -0.8
Trbv29A0A0G2LB96 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC10.08□□□□□ -0.8
Trbv29A0A0G2LB96 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC10.08□□□□□ -0.8
Trbv29A0A0G2LB96 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trbv29A0A0G2LB96 Dhrs4-202ENSMUST00000226168 828 ntBASIC10.08□□□□□ -0.8
Trbv29A0A0G2LB96 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trbv29A0A0G2LB96 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trbv29A0A0G2LB96 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trbv29A0A0G2LB96 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Trbv29A0A0G2LB96 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trbv29A0A0G2LB96 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trbv29A0A0G2LB96 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trbv29A0A0G2LB96 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC10.08□□□□□ -0.8
Trbv29A0A0G2LB96 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trbv29A0A0G2LB96 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
Trbv29A0A0G2LB96 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trbv29A0A0G2LB96 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trbv29A0A0G2LB96 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC10.08□□□□□ -0.8
Trbv29A0A0G2LB96 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trbv29A0A0G2LB96 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trbv29A0A0G2LB96 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trbv29A0A0G2LB96 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC10.08□□□□□ -0.8
Trbv29A0A0G2LB96 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trbv29A0A0G2LB96 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trbv29A0A0G2LB96 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.08□□□□□ -0.8
Trbv29A0A0G2LB96 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trbv29A0A0G2LB96 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trbv29A0A0G2LB96 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trbv29A0A0G2LB96 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 Gm8706-201ENSMUST00000197372 1491 ntBASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 Gm12201-201ENSMUST00000120657 1234 ntBASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 Gm16177-201ENSMUST00000120728 718 ntBASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 Gm8738-201ENSMUST00000172606 329 ntBASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 Gm8494-201ENSMUST00000178171 1233 ntBASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 Gm45059-201ENSMUST00000205558 1077 ntBASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 Gm44799-201ENSMUST00000207639 1202 ntBASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 Gm39404-201ENSMUST00000216350 313 ntBASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 Gm5620-201ENSMUST00000077991 1348 ntBASIC10.07□□□□□ -0.8
Trbv29A0A0G2LB96 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trbv29A0A0G2LB96 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trbv29A0A0G2LB96 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trbv29A0A0G2LB96 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trbv29A0A0G2LB96 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC10.06□□□□□ -0.8
Trbv29A0A0G2LB96 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms