Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Trav9n-2A0A0G2JDP3 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav9n-2A0A0G2JDP3 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC8.83□□□□□ -1
Trav9n-2A0A0G2JDP3 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trav9n-2A0A0G2JDP3 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav9n-2A0A0G2JDP3 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trav9n-2A0A0G2JDP3 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trav9n-2A0A0G2JDP3 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC8.83□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm11793-201ENSMUST00000120433 981 ntBASIC8.83□□□□□ -1
Trav9n-2A0A0G2JDP3 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Trav9n-2A0A0G2JDP3 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trav9n-2A0A0G2JDP3 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm25043-201ENSMUST00000158604 212 ntBASIC8.83□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm27390-201ENSMUST00000184516 176 ntBASIC8.83□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm42937-201ENSMUST00000197360 752 ntBASIC8.83□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm19309-201ENSMUST00000218295 205 ntBASIC8.83□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm8227-201ENSMUST00000223306 571 ntBASIC8.83□□□□□ -1
Trav9n-2A0A0G2JDP3 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav9n-2A0A0G2JDP3 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC8.83□□□□□ -1
Trav9n-2A0A0G2JDP3 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Trav9n-2A0A0G2JDP3 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC8.83□□□□□ -1
Trav9n-2A0A0G2JDP3 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav9n-2A0A0G2JDP3 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Trav9n-2A0A0G2JDP3 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav9n-2A0A0G2JDP3 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm9200-201ENSMUST00000118513 1354 ntBASIC8.83□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm2673-201ENSMUST00000120958 1608 ntBASIC8.83□□□□□ -1
Trav9n-2A0A0G2JDP3 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC8.83□□□□□ -1
Trav9n-2A0A0G2JDP3 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav9n-2A0A0G2JDP3 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Trav9n-2A0A0G2JDP3 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm43365-201ENSMUST00000196522 2106 ntBASIC8.83□□□□□ -1
Trav9n-2A0A0G2JDP3 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC8.83□□□□□ -1
Trav9n-2A0A0G2JDP3 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Trav9n-2A0A0G2JDP3 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm13142-201ENSMUST00000117213 1453 ntBASIC8.83□□□□□ -1
Trav9n-2A0A0G2JDP3 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm7049-201ENSMUST00000223520 1712 ntBASIC8.83□□□□□ -1
Trav9n-2A0A0G2JDP3 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 AC157950.1-201ENSMUST00000217561 2168 ntBASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm24934-201ENSMUST00000103764 111 ntBASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm15370-201ENSMUST00000117158 253 ntBASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm29396-201ENSMUST00000185659 716 ntBASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm18054-201ENSMUST00000207539 555 ntBASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm5186-201ENSMUST00000218781 920 ntBASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 CU024892.2-201ENSMUST00000224608 832 ntBASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Dopey2-207ENSMUST00000227156 7340 ntBASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Trav9n-2A0A0G2JDP3 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms