Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
H2afb2S4R1M3 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
H2afb2S4R1M3 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
H2afb2S4R1M3 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.16□□□□□ -0.46
H2afb2S4R1M3 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb2S4R1M3 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb2S4R1M3 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.16□□□□□ -0.46
H2afb2S4R1M3 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
H2afb2S4R1M3 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb2S4R1M3 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
H2afb2S4R1M3 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb2S4R1M3 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
H2afb2S4R1M3 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.16□□□□□ -0.46
H2afb2S4R1M3 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.16□□□□□ -0.46
H2afb2S4R1M3 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.16□□□□□ -0.46
H2afb2S4R1M3 Gm9368-201ENSMUST00000219348 831 ntBASIC12.16□□□□□ -0.46
H2afb2S4R1M3 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.16□□□□□ -0.46
H2afb2S4R1M3 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.16□□□□□ -0.46
H2afb2S4R1M3 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.16□□□□□ -0.46
H2afb2S4R1M3 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.16□□□□□ -0.46
H2afb2S4R1M3 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
H2afb2S4R1M3 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb2S4R1M3 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb2S4R1M3 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.16□□□□□ -0.46
H2afb2S4R1M3 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb2S4R1M3 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.16□□□□□ -0.46
H2afb2S4R1M3 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
H2afb2S4R1M3 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb2S4R1M3 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
H2afb2S4R1M3 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb2S4R1M3 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb2S4R1M3 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
H2afb2S4R1M3 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
H2afb2S4R1M3 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
H2afb2S4R1M3 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb2S4R1M3 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb2S4R1M3 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb2S4R1M3 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb2S4R1M3 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb2S4R1M3 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.15□□□□□ -0.46
H2afb2S4R1M3 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.15□□□□□ -0.46
H2afb2S4R1M3 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb2S4R1M3 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb2S4R1M3 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
H2afb2S4R1M3 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb2S4R1M3 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb2S4R1M3 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb2S4R1M3 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb2S4R1M3 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb2S4R1M3 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb2S4R1M3 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb2S4R1M3 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.15□□□□□ -0.46
H2afb2S4R1M3 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.15□□□□□ -0.46
H2afb2S4R1M3 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb2S4R1M3 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.15□□□□□ -0.46
H2afb2S4R1M3 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb2S4R1M3 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.15□□□□□ -0.46
H2afb2S4R1M3 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.15□□□□□ -0.46
H2afb2S4R1M3 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
H2afb2S4R1M3 Gm8712-201ENSMUST00000221090 701 ntBASIC12.15□□□□□ -0.46
H2afb2S4R1M3 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.15□□□□□ -0.46
H2afb2S4R1M3 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.15□□□□□ -0.46
H2afb2S4R1M3 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb2S4R1M3 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.15□□□□□ -0.46
H2afb2S4R1M3 Gm10312-201ENSMUST00000078515 489 ntBASIC12.15□□□□□ -0.46
H2afb2S4R1M3 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb2S4R1M3 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb2S4R1M3 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb2S4R1M3 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb2S4R1M3 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb2S4R1M3 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
H2afb2S4R1M3 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
H2afb2S4R1M3 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb2S4R1M3 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb2S4R1M3 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb2S4R1M3 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb2S4R1M3 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
H2afb2S4R1M3 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
H2afb2S4R1M3 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
H2afb2S4R1M3 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
H2afb2S4R1M3 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb2S4R1M3 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms