Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC10.88□□□□□ -0.67
Cldn13Q9Z0S4 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cldn13Q9Z0S4 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC10.87□□□□□ -0.67
Cldn13Q9Z0S4 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn13Q9Z0S4 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn13Q9Z0S4 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn13Q9Z0S4 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cldn13Q9Z0S4 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn13Q9Z0S4 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn13Q9Z0S4 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.87□□□□□ -0.67
Cldn13Q9Z0S4 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn13Q9Z0S4 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn13Q9Z0S4 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn13Q9Z0S4 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn13Q9Z0S4 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn13Q9Z0S4 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC10.87□□□□□ -0.67
Cldn13Q9Z0S4 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn13Q9Z0S4 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn13Q9Z0S4 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC10.87□□□□□ -0.67
Cldn13Q9Z0S4 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn13Q9Z0S4 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn13Q9Z0S4 Gm14726-201ENSMUST00000120623 896 ntBASIC10.87□□□□□ -0.67
Cldn13Q9Z0S4 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn13Q9Z0S4 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn13Q9Z0S4 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn13Q9Z0S4 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn13Q9Z0S4 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC10.87□□□□□ -0.67
Cldn13Q9Z0S4 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Cldn13Q9Z0S4 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Cldn13Q9Z0S4 Gm9022-201ENSMUST00000182482 992 ntBASIC10.87□□□□□ -0.67
Cldn13Q9Z0S4 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC10.87□□□□□ -0.67
Cldn13Q9Z0S4 Gm27320-201ENSMUST00000184892 109 ntBASIC10.87□□□□□ -0.67
Cldn13Q9Z0S4 Ighv1-62-201ENSMUST00000193406 350 ntBASIC10.87□□□□□ -0.67
Cldn13Q9Z0S4 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Cldn13Q9Z0S4 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn13Q9Z0S4 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn13Q9Z0S4 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn13Q9Z0S4 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC10.87□□□□□ -0.67
Cldn13Q9Z0S4 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn13Q9Z0S4 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn13Q9Z0S4 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn13Q9Z0S4 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn13Q9Z0S4 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn13Q9Z0S4 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn13Q9Z0S4 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn13Q9Z0S4 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn13Q9Z0S4 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn13Q9Z0S4 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn13Q9Z0S4 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn13Q9Z0S4 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn13Q9Z0S4 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cldn13Q9Z0S4 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Gm23270-201ENSMUST00000104055 131 ntBASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Gm20482-202ENSMUST00000174729 825 ntBASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Gm27243-201ENSMUST00000183964 521 ntBASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Gm31256-201ENSMUST00000194705 506 ntBASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Gm39404-201ENSMUST00000216350 313 ntBASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Gm9257-201ENSMUST00000221254 232 ntBASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 AC130671.2-201ENSMUST00000227224 1621 ntBASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cldn13Q9Z0S4 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms