Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tubd1Q9R1K7 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Tubd1Q9R1K7 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tubd1Q9R1K7 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tubd1Q9R1K7 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.32□□□□□ -0.44
Tubd1Q9R1K7 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tubd1Q9R1K7 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tubd1Q9R1K7 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.32□□□□□ -0.44
Tubd1Q9R1K7 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Tubd1Q9R1K7 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tubd1Q9R1K7 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tubd1Q9R1K7 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tubd1Q9R1K7 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tubd1Q9R1K7 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tubd1Q9R1K7 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tubd1Q9R1K7 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.31□□□□□ -0.44
Tubd1Q9R1K7 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tubd1Q9R1K7 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tubd1Q9R1K7 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tubd1Q9R1K7 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tubd1Q9R1K7 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tubd1Q9R1K7 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Tubd1Q9R1K7 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.31□□□□□ -0.44
Tubd1Q9R1K7 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tubd1Q9R1K7 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.31□□□□□ -0.44
Tubd1Q9R1K7 Gm19287-201ENSMUST00000203190 358 ntBASIC12.31□□□□□ -0.44
Tubd1Q9R1K7 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.31□□□□□ -0.44
Tubd1Q9R1K7 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tubd1Q9R1K7 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tubd1Q9R1K7 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tubd1Q9R1K7 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tubd1Q9R1K7 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tubd1Q9R1K7 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tubd1Q9R1K7 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tubd1Q9R1K7 Rubie-203ENSMUST00000227803 2430 ntBASIC12.31□□□□□ -0.44
Tubd1Q9R1K7 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tubd1Q9R1K7 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tubd1Q9R1K7 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tubd1Q9R1K7 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tubd1Q9R1K7 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tubd1Q9R1K7 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Tubd1Q9R1K7 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tubd1Q9R1K7 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tubd1Q9R1K7 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Tubd1Q9R1K7 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.3□□□□□ -0.44
Tubd1Q9R1K7 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tubd1Q9R1K7 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.3□□□□□ -0.44
Tubd1Q9R1K7 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tubd1Q9R1K7 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tubd1Q9R1K7 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.3□□□□□ -0.44
Tubd1Q9R1K7 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tubd1Q9R1K7 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.3□□□□□ -0.44
Tubd1Q9R1K7 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tubd1Q9R1K7 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tubd1Q9R1K7 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tubd1Q9R1K7 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tubd1Q9R1K7 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tubd1Q9R1K7 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Tubd1Q9R1K7 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.3□□□□□ -0.44
Tubd1Q9R1K7 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Tubd1Q9R1K7 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Tubd1Q9R1K7 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Tubd1Q9R1K7 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Tubd1Q9R1K7 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.3□□□□□ -0.44
Tubd1Q9R1K7 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.3□□□□□ -0.44
Tubd1Q9R1K7 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.3□□□□□ -0.44
Tubd1Q9R1K7 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.3□□□□□ -0.44
Tubd1Q9R1K7 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.3□□□□□ -0.44
Tubd1Q9R1K7 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Tubd1Q9R1K7 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Tubd1Q9R1K7 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tubd1Q9R1K7 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Tubd1Q9R1K7 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.3□□□□□ -0.44
Tubd1Q9R1K7 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Tubd1Q9R1K7 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.3□□□□□ -0.44
Tubd1Q9R1K7 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tubd1Q9R1K7 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tubd1Q9R1K7 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tubd1Q9R1K7 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tubd1Q9R1K7 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tubd1Q9R1K7 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Tubd1Q9R1K7 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tubd1Q9R1K7 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.3□□□□□ -0.44
Tubd1Q9R1K7 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tubd1Q9R1K7 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tubd1Q9R1K7 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tubd1Q9R1K7 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tubd1Q9R1K7 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Tubd1Q9R1K7 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.29□□□□□ -0.44
Tubd1Q9R1K7 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.29□□□□□ -0.44
Tubd1Q9R1K7 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.29□□□□□ -0.44
Tubd1Q9R1K7 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Tubd1Q9R1K7 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tubd1Q9R1K7 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.29□□□□□ -0.44
Tubd1Q9R1K7 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.29□□□□□ -0.44
Tubd1Q9R1K7 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tubd1Q9R1K7 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Tubd1Q9R1K7 Gm11660-201ENSMUST00000120955 412 ntBASIC12.29□□□□□ -0.44
Tubd1Q9R1K7 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.29□□□□□ -0.44
Tubd1Q9R1K7 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms