Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf4Q9QZS2 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Rnf4Q9QZS2 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12.28□□□□□ -0.44
Rnf4Q9QZS2 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf4Q9QZS2 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf4Q9QZS2 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf4Q9QZS2 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.28□□□□□ -0.44
Rnf4Q9QZS2 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf4Q9QZS2 Gm11439-201ENSMUST00000118598 409 ntBASIC12.28□□□□□ -0.44
Rnf4Q9QZS2 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.28□□□□□ -0.44
Rnf4Q9QZS2 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Rnf4Q9QZS2 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf4Q9QZS2 Gm6152-201ENSMUST00000151704 340 ntBASIC12.28□□□□□ -0.44
Rnf4Q9QZS2 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf4Q9QZS2 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.28□□□□□ -0.44
Rnf4Q9QZS2 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.28□□□□□ -0.44
Rnf4Q9QZS2 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf4Q9QZS2 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf4Q9QZS2 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf4Q9QZS2 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Rnf4Q9QZS2 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf4Q9QZS2 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf4Q9QZS2 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Rnf4Q9QZS2 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf4Q9QZS2 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf4Q9QZS2 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Rnf4Q9QZS2 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf4Q9QZS2 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf4Q9QZS2 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf4Q9QZS2 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.28□□□□□ -0.44
Rnf4Q9QZS2 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf4Q9QZS2 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf4Q9QZS2 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Rnf4Q9QZS2 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Rnf4Q9QZS2 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf4Q9QZS2 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf4Q9QZS2 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf4Q9QZS2 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rnf4Q9QZS2 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rnf4Q9QZS2 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Rnf4Q9QZS2 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Rnf4Q9QZS2 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rnf4Q9QZS2 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Rnf4Q9QZS2 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
Rnf4Q9QZS2 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.27□□□□□ -0.44
Rnf4Q9QZS2 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rnf4Q9QZS2 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rnf4Q9QZS2 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf4Q9QZS2 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf4Q9QZS2 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf4Q9QZS2 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf4Q9QZS2 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.27□□□□□ -0.45
Rnf4Q9QZS2 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf4Q9QZS2 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf4Q9QZS2 Gm29667-201ENSMUST00000190817 490 ntBASIC12.27□□□□□ -0.45
Rnf4Q9QZS2 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf4Q9QZS2 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf4Q9QZS2 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf4Q9QZS2 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.27□□□□□ -0.45
Rnf4Q9QZS2 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf4Q9QZS2 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.27□□□□□ -0.45
Rnf4Q9QZS2 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Rnf4Q9QZS2 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf4Q9QZS2 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.27□□□□□ -0.45
Rnf4Q9QZS2 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Rnf4Q9QZS2 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf4Q9QZS2 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf4Q9QZS2 Gm36940-201ENSMUST00000194281 2036 ntBASIC12.27□□□□□ -0.45
Rnf4Q9QZS2 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf4Q9QZS2 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Rnf4Q9QZS2 Gm6560-201ENSMUST00000198588 1591 ntBASIC12.26□□□□□ -0.45
Rnf4Q9QZS2 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf4Q9QZS2 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf4Q9QZS2 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf4Q9QZS2 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf4Q9QZS2 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf4Q9QZS2 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf4Q9QZS2 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf4Q9QZS2 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf4Q9QZS2 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Rnf4Q9QZS2 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.26□□□□□ -0.45
Rnf4Q9QZS2 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf4Q9QZS2 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Rnf4Q9QZS2 Snord83b-201ENSMUST00000104546 94 ntBASIC12.26□□□□□ -0.45
Rnf4Q9QZS2 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf4Q9QZS2 Gm11618-201ENSMUST00000117946 267 ntBASIC12.26□□□□□ -0.45
Rnf4Q9QZS2 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.26□□□□□ -0.45
Rnf4Q9QZS2 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.26□□□□□ -0.45
Rnf4Q9QZS2 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf4Q9QZS2 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.26□□□□□ -0.45
Rnf4Q9QZS2 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf4Q9QZS2 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf4Q9QZS2 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.26□□□□□ -0.45
Rnf4Q9QZS2 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Rnf4Q9QZS2 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Rnf4Q9QZS2 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.26□□□□□ -0.45
Rnf4Q9QZS2 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf4Q9QZS2 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf4Q9QZS2 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf4Q9QZS2 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms