Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Ube3bQ9ES34 AC173482.6-201ENSMUST00000225889 1741 ntBASIC14.46□□□□□ -0.09
Ube3bQ9ES34 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ube3bQ9ES34 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ube3bQ9ES34 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Ube3bQ9ES34 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ube3bQ9ES34 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ube3bQ9ES34 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ube3bQ9ES34 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ube3bQ9ES34 Gm8155-201ENSMUST00000216363 1612 ntBASIC14.46□□□□□ -0.09
Ube3bQ9ES34 Gm12857-201ENSMUST00000117678 592 ntBASIC14.46□□□□□ -0.09
Ube3bQ9ES34 Gm12566-201ENSMUST00000121479 359 ntBASIC14.46□□□□□ -0.09
Ube3bQ9ES34 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ube3bQ9ES34 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ube3bQ9ES34 B9d1os-201ENSMUST00000137010 674 ntBASIC14.46□□□□□ -0.09
Ube3bQ9ES34 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ube3bQ9ES34 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC14.46□□□□□ -0.09
Ube3bQ9ES34 Gm42599-201ENSMUST00000201308 469 ntBASIC14.46□□□□□ -0.09
Ube3bQ9ES34 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.46□□□□□ -0.09
Ube3bQ9ES34 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC14.46□□□□□ -0.09
Ube3bQ9ES34 Abhd11os-203ENSMUST00000222613 363 ntBASIC14.46□□□□□ -0.09
Ube3bQ9ES34 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ube3bQ9ES34 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ube3bQ9ES34 Gm21811-201ENSMUST00000096485 930 ntBASIC14.46□□□□□ -0.09
Ube3bQ9ES34 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Ube3bQ9ES34 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Ube3bQ9ES34 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ube3bQ9ES34 Gm43267-201ENSMUST00000199664 1796 ntBASIC14.46□□□□□ -0.09
Ube3bQ9ES34 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ube3bQ9ES34 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ube3bQ9ES34 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ube3bQ9ES34 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Ube3bQ9ES34 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ube3bQ9ES34 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ube3bQ9ES34 AC091458.1-201ENSMUST00000220902 1361 ntBASIC14.46□□□□□ -0.1
Ube3bQ9ES34 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ube3bQ9ES34 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ube3bQ9ES34 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ube3bQ9ES34 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ube3bQ9ES34 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube3bQ9ES34 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ube3bQ9ES34 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube3bQ9ES34 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ube3bQ9ES34 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Ube3bQ9ES34 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube3bQ9ES34 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube3bQ9ES34 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube3bQ9ES34 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube3bQ9ES34 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC14.45□□□□□ -0.1
Ube3bQ9ES34 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube3bQ9ES34 Gm11660-201ENSMUST00000120955 412 ntBASIC14.45□□□□□ -0.1
Ube3bQ9ES34 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ube3bQ9ES34 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ube3bQ9ES34 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC14.45□□□□□ -0.1
Ube3bQ9ES34 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC14.45□□□□□ -0.1
Ube3bQ9ES34 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube3bQ9ES34 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube3bQ9ES34 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ube3bQ9ES34 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC14.45□□□□□ -0.1
Ube3bQ9ES34 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube3bQ9ES34 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube3bQ9ES34 Gm9797-202ENSMUST00000218003 294 ntBASIC14.45□□□□□ -0.1
Ube3bQ9ES34 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Ube3bQ9ES34 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube3bQ9ES34 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ube3bQ9ES34 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube3bQ9ES34 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube3bQ9ES34 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC14.45□□□□□ -0.1
Ube3bQ9ES34 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ube3bQ9ES34 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC14.45□□□□□ -0.1
Ube3bQ9ES34 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ube3bQ9ES34 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube3bQ9ES34 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Ube3bQ9ES34 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ube3bQ9ES34 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Ube3bQ9ES34 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube3bQ9ES34 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ube3bQ9ES34 Gm43289-201ENSMUST00000200537 1475 ntBASIC14.44□□□□□ -0.1
Ube3bQ9ES34 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ube3bQ9ES34 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ube3bQ9ES34 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ube3bQ9ES34 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Ube3bQ9ES34 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ube3bQ9ES34 Map1b-203ENSMUST00000223725 2669 ntBASIC14.44□□□□□ -0.1
Ube3bQ9ES34 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ube3bQ9ES34 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ube3bQ9ES34 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Ube3bQ9ES34 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ube3bQ9ES34 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ube3bQ9ES34 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ube3bQ9ES34 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.44□□□□□ -0.1
Ube3bQ9ES34 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ube3bQ9ES34 Gm27530-201ENSMUST00000184096 98 ntBASIC14.44□□□□□ -0.1
Ube3bQ9ES34 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC14.44□□□□□ -0.1
Ube3bQ9ES34 Gm5369-201ENSMUST00000217499 588 ntBASIC14.44□□□□□ -0.1
Ube3bQ9ES34 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC14.44□□□□□ -0.1
Ube3bQ9ES34 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC14.44□□□□□ -0.1
Ube3bQ9ES34 AC131330.1-201ENSMUST00000227814 1015 ntBASIC14.44□□□□□ -0.1
Ube3bQ9ES34 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ube3bQ9ES34 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms