Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Nkx2-4Q9EQM3 Gm12943-201ENSMUST00000119616 210 ntBASIC12.46□□□□□ -0.41
Nkx2-4Q9EQM3 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC12.46□□□□□ -0.41
Nkx2-4Q9EQM3 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC12.46□□□□□ -0.41
Nkx2-4Q9EQM3 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.46□□□□□ -0.41
Nkx2-4Q9EQM3 Gm4310-201ENSMUST00000177847 889 ntBASIC12.46□□□□□ -0.41
Nkx2-4Q9EQM3 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx2-4Q9EQM3 Gm18460-201ENSMUST00000208088 464 ntBASIC12.46□□□□□ -0.41
Nkx2-4Q9EQM3 AC168279.1-201ENSMUST00000214611 382 ntBASIC12.46□□□□□ -0.41
Nkx2-4Q9EQM3 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Nkx2-4Q9EQM3 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx2-4Q9EQM3 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx2-4Q9EQM3 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx2-4Q9EQM3 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx2-4Q9EQM3 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.46□□□□□ -0.42
Nkx2-4Q9EQM3 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nkx2-4Q9EQM3 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nkx2-4Q9EQM3 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.42
Nkx2-4Q9EQM3 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Nkx2-4Q9EQM3 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nkx2-4Q9EQM3 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nkx2-4Q9EQM3 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nkx2-4Q9EQM3 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nkx2-4Q9EQM3 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Nkx2-4Q9EQM3 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.46□□□□□ -0.42
Nkx2-4Q9EQM3 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 Gm25766-201ENSMUST00000104101 131 ntBASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 Gm23912-201ENSMUST00000104687 87 ntBASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 Gm15004-201ENSMUST00000119192 630 ntBASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 Gm12407-201ENSMUST00000180219 324 ntBASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 Gm26989-201ENSMUST00000182608 749 ntBASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 Gm3318-201ENSMUST00000217604 1183 ntBASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-4Q9EQM3 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.44□□□□□ -0.42
Nkx2-4Q9EQM3 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-4Q9EQM3 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-4Q9EQM3 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-4Q9EQM3 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.44□□□□□ -0.42
Nkx2-4Q9EQM3 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-4Q9EQM3 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-4Q9EQM3 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-4Q9EQM3 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-4Q9EQM3 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Nkx2-4Q9EQM3 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-4Q9EQM3 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-4Q9EQM3 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-4Q9EQM3 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Nkx2-4Q9EQM3 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.44□□□□□ -0.42
Nkx2-4Q9EQM3 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Nkx2-4Q9EQM3 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nkx2-4Q9EQM3 Gm24791-201ENSMUST00000104284 131 ntBASIC12.44□□□□□ -0.42
Nkx2-4Q9EQM3 Gm14807-201ENSMUST00000116640 983 ntBASIC12.44□□□□□ -0.42
Nkx2-4Q9EQM3 Gm12218-201ENSMUST00000117666 399 ntBASIC12.44□□□□□ -0.42
Nkx2-4Q9EQM3 Gm11979-201ENSMUST00000119629 743 ntBASIC12.44□□□□□ -0.42
Nkx2-4Q9EQM3 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms