Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Gm6334-201ENSMUST00000207083 228 ntBASIC12.66□□□□□ -0.38
Cpne8Q9DC53 Gm18062-201ENSMUST00000208020 547 ntBASIC12.66□□□□□ -0.38
Cpne8Q9DC53 Gm18055-201ENSMUST00000208254 547 ntBASIC12.66□□□□□ -0.38
Cpne8Q9DC53 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne8Q9DC53 Gm8712-201ENSMUST00000221090 701 ntBASIC12.66□□□□□ -0.38
Cpne8Q9DC53 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne8Q9DC53 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne8Q9DC53 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne8Q9DC53 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne8Q9DC53 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne8Q9DC53 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne8Q9DC53 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cpne8Q9DC53 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.66□□□□□ -0.38
Cpne8Q9DC53 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne8Q9DC53 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne8Q9DC53 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne8Q9DC53 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne8Q9DC53 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne8Q9DC53 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne8Q9DC53 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne8Q9DC53 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne8Q9DC53 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.66□□□□□ -0.38
Cpne8Q9DC53 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne8Q9DC53 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne8Q9DC53 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne8Q9DC53 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne8Q9DC53 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpne8Q9DC53 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne8Q9DC53 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Cpne8Q9DC53 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.65□□□□□ -0.38
Cpne8Q9DC53 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne8Q9DC53 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne8Q9DC53 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne8Q9DC53 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne8Q9DC53 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne8Q9DC53 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.65□□□□□ -0.38
Cpne8Q9DC53 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.65□□□□□ -0.38
Cpne8Q9DC53 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Cpne8Q9DC53 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne8Q9DC53 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne8Q9DC53 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.65□□□□□ -0.38
Cpne8Q9DC53 Rubie-203ENSMUST00000227803 2430 ntBASIC12.65□□□□□ -0.38
Cpne8Q9DC53 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne8Q9DC53 Gm7722-201ENSMUST00000120646 741 ntBASIC12.65□□□□□ -0.38
Cpne8Q9DC53 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.65□□□□□ -0.38
Cpne8Q9DC53 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne8Q9DC53 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.65□□□□□ -0.38
Cpne8Q9DC53 Gm27516-201ENSMUST00000184237 98 ntBASIC12.65□□□□□ -0.38
Cpne8Q9DC53 Mir8109-201ENSMUST00000184375 117 ntBASIC12.65□□□□□ -0.38
Cpne8Q9DC53 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.65□□□□□ -0.38
Cpne8Q9DC53 AY702102-202ENSMUST00000194651 1173 ntBASIC12.65□□□□□ -0.38
Cpne8Q9DC53 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne8Q9DC53 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne8Q9DC53 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.65□□□□□ -0.38
Cpne8Q9DC53 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cpne8Q9DC53 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.65□□□□□ -0.38
Cpne8Q9DC53 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne8Q9DC53 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne8Q9DC53 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne8Q9DC53 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne8Q9DC53 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.65□□□□□ -0.38
Cpne8Q9DC53 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne8Q9DC53 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cpne8Q9DC53 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.65□□□□□ -0.38
Cpne8Q9DC53 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cpne8Q9DC53 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cpne8Q9DC53 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cpne8Q9DC53 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.65□□□□□ -0.39
Cpne8Q9DC53 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Cpne8Q9DC53 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.39
Cpne8Q9DC53 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne8Q9DC53 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne8Q9DC53 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.64□□□□□ -0.39
Cpne8Q9DC53 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne8Q9DC53 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne8Q9DC53 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne8Q9DC53 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne8Q9DC53 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne8Q9DC53 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne8Q9DC53 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne8Q9DC53 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.64□□□□□ -0.39
Cpne8Q9DC53 Gm13297-201ENSMUST00000120205 934 ntBASIC12.64□□□□□ -0.39
Cpne8Q9DC53 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.64□□□□□ -0.39
Cpne8Q9DC53 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Cpne8Q9DC53 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.64□□□□□ -0.39
Cpne8Q9DC53 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Cpne8Q9DC53 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.64□□□□□ -0.39
Cpne8Q9DC53 Gm27501-201ENSMUST00000183599 107 ntBASIC12.64□□□□□ -0.39
Cpne8Q9DC53 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Cpne8Q9DC53 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.64□□□□□ -0.39
Cpne8Q9DC53 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne8Q9DC53 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.64□□□□□ -0.39
Cpne8Q9DC53 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne8Q9DC53 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cpne8Q9DC53 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne8Q9DC53 Gm9996-201ENSMUST00000070359 913 ntBASIC12.64□□□□□ -0.39
Cpne8Q9DC53 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne8Q9DC53 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne8Q9DC53 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cpne8Q9DC53 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms