Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdc40Q9DC48 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Cdc40Q9DC48 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdc40Q9DC48 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdc40Q9DC48 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdc40Q9DC48 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdc40Q9DC48 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdc40Q9DC48 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdc40Q9DC48 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdc40Q9DC48 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdc40Q9DC48 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Cdc40Q9DC48 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdc40Q9DC48 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdc40Q9DC48 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdc40Q9DC48 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdc40Q9DC48 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Cdc40Q9DC48 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdc40Q9DC48 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdc40Q9DC48 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdc40Q9DC48 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdc40Q9DC48 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdc40Q9DC48 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.34□□□□□ -0.59
Cdc40Q9DC48 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdc40Q9DC48 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Cdc40Q9DC48 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Cdc40Q9DC48 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Cdc40Q9DC48 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.33□□□□□ -0.6
Cdc40Q9DC48 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.33□□□□□ -0.6
Cdc40Q9DC48 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdc40Q9DC48 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Cdc40Q9DC48 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.33□□□□□ -0.6
Cdc40Q9DC48 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdc40Q9DC48 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdc40Q9DC48 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Cdc40Q9DC48 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.33□□□□□ -0.6
Cdc40Q9DC48 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdc40Q9DC48 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdc40Q9DC48 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdc40Q9DC48 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdc40Q9DC48 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdc40Q9DC48 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdc40Q9DC48 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdc40Q9DC48 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdc40Q9DC48 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdc40Q9DC48 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdc40Q9DC48 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdc40Q9DC48 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdc40Q9DC48 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Cdc40Q9DC48 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.33□□□□□ -0.6
Cdc40Q9DC48 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdc40Q9DC48 Gm16505-201ENSMUST00000179981 232 ntBASIC11.33□□□□□ -0.6
Cdc40Q9DC48 Mir7070-201ENSMUST00000183657 86 ntBASIC11.33□□□□□ -0.6
Cdc40Q9DC48 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.33□□□□□ -0.6
Cdc40Q9DC48 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.33□□□□□ -0.6
Cdc40Q9DC48 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.33□□□□□ -0.6
Cdc40Q9DC48 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdc40Q9DC48 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdc40Q9DC48 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdc40Q9DC48 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdc40Q9DC48 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.33□□□□□ -0.6
Cdc40Q9DC48 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdc40Q9DC48 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.33□□□□□ -0.6
Cdc40Q9DC48 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdc40Q9DC48 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.33□□□□□ -0.6
Cdc40Q9DC48 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdc40Q9DC48 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdc40Q9DC48 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdc40Q9DC48 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Cdc40Q9DC48 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdc40Q9DC48 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdc40Q9DC48 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.32□□□□□ -0.6
Cdc40Q9DC48 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdc40Q9DC48 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdc40Q9DC48 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.32□□□□□ -0.6
Cdc40Q9DC48 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.32□□□□□ -0.6
Cdc40Q9DC48 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdc40Q9DC48 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdc40Q9DC48 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdc40Q9DC48 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdc40Q9DC48 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Cdc40Q9DC48 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdc40Q9DC48 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdc40Q9DC48 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdc40Q9DC48 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdc40Q9DC48 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Cdc40Q9DC48 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Cdc40Q9DC48 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Cdc40Q9DC48 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Cdc40Q9DC48 Gm14109-201ENSMUST00000118814 309 ntBASIC11.32□□□□□ -0.6
Cdc40Q9DC48 Gm13315-201ENSMUST00000120376 991 ntBASIC11.32□□□□□ -0.6
Cdc40Q9DC48 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.32□□□□□ -0.6
Cdc40Q9DC48 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.32□□□□□ -0.6
Cdc40Q9DC48 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Cdc40Q9DC48 Gm27341-201ENSMUST00000183570 106 ntBASIC11.32□□□□□ -0.6
Cdc40Q9DC48 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.32□□□□□ -0.6
Cdc40Q9DC48 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdc40Q9DC48 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
Cdc40Q9DC48 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdc40Q9DC48 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdc40Q9DC48 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms