Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.94□□□□□ -0.5
Rrp8Q9DB85 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rrp8Q9DB85 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Rrp8Q9DB85 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rrp8Q9DB85 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rrp8Q9DB85 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rrp8Q9DB85 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rrp8Q9DB85 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rrp8Q9DB85 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rrp8Q9DB85 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Rrp8Q9DB85 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.94□□□□□ -0.5
Rrp8Q9DB85 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Rrp8Q9DB85 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Rrp8Q9DB85 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.94□□□□□ -0.5
Rrp8Q9DB85 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.94□□□□□ -0.5
Rrp8Q9DB85 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Rrp8Q9DB85 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rrp8Q9DB85 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rrp8Q9DB85 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rrp8Q9DB85 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rrp8Q9DB85 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rrp8Q9DB85 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rrp8Q9DB85 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rrp8Q9DB85 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rrp8Q9DB85 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Rrp8Q9DB85 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rrp8Q9DB85 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rrp8Q9DB85 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.93□□□□□ -0.5
Rrp8Q9DB85 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rrp8Q9DB85 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rrp8Q9DB85 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Rrp8Q9DB85 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.93□□□□□ -0.5
Rrp8Q9DB85 Gm16397-201ENSMUST00000122201 494 ntBASIC11.93□□□□□ -0.5
Rrp8Q9DB85 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.93□□□□□ -0.5
Rrp8Q9DB85 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.93□□□□□ -0.5
Rrp8Q9DB85 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rrp8Q9DB85 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC11.93□□□□□ -0.5
Rrp8Q9DB85 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rrp8Q9DB85 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rrp8Q9DB85 Gm4797-201ENSMUST00000219075 1283 ntBASIC11.93□□□□□ -0.5
Rrp8Q9DB85 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.93□□□□□ -0.5
Rrp8Q9DB85 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rrp8Q9DB85 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rrp8Q9DB85 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Rrp8Q9DB85 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rrp8Q9DB85 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Rrp8Q9DB85 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rrp8Q9DB85 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rrp8Q9DB85 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Rrp8Q9DB85 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rrp8Q9DB85 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rrp8Q9DB85 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rrp8Q9DB85 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rrp8Q9DB85 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.93□□□□□ -0.5
Rrp8Q9DB85 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rrp8Q9DB85 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.93□□□□□ -0.5
Rrp8Q9DB85 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.93□□□□□ -0.5
Rrp8Q9DB85 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.93□□□□□ -0.5
Rrp8Q9DB85 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.93□□□□□ -0.5
Rrp8Q9DB85 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rrp8Q9DB85 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Rrp8Q9DB85 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rrp8Q9DB85 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Rrp8Q9DB85 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.92□□□□□ -0.5
Rrp8Q9DB85 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rrp8Q9DB85 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rrp8Q9DB85 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rrp8Q9DB85 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rrp8Q9DB85 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Rrp8Q9DB85 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rrp8Q9DB85 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rrp8Q9DB85 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.92□□□□□ -0.5
Rrp8Q9DB85 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rrp8Q9DB85 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rrp8Q9DB85 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rrp8Q9DB85 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Rrp8Q9DB85 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.92□□□□□ -0.5
Rrp8Q9DB85 Gm4726-201ENSMUST00000135604 736 ntBASIC11.92□□□□□ -0.5
Rrp8Q9DB85 Gm6019-201ENSMUST00000148369 736 ntBASIC11.92□□□□□ -0.5
Rrp8Q9DB85 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC11.92□□□□□ -0.5
Rrp8Q9DB85 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Rrp8Q9DB85 Gm9463-201ENSMUST00000206707 601 ntBASIC11.92□□□□□ -0.5
Rrp8Q9DB85 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rrp8Q9DB85 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rrp8Q9DB85 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.92□□□□□ -0.5
Rrp8Q9DB85 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.92□□□□□ -0.5
Rrp8Q9DB85 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.92□□□□□ -0.5
Rrp8Q9DB85 AC171241.1-201ENSMUST00000228144 1166 ntBASIC11.92□□□□□ -0.5
Rrp8Q9DB85 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Rrp8Q9DB85 Gm26035-201ENSMUST00000083065 308 ntBASIC11.92□□□□□ -0.5
Rrp8Q9DB85 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rrp8Q9DB85 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rrp8Q9DB85 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rrp8Q9DB85 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rrp8Q9DB85 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rrp8Q9DB85 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rrp8Q9DB85 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.92□□□□□ -0.5
Rrp8Q9DB85 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rrp8Q9DB85 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Rrp8Q9DB85 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms