Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Gm37008-201ENSMUST00000195712 319 ntBASIC14.56□□□□□ -0.08
Chmp4cQ9D7F7 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Chmp4cQ9D7F7 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp4cQ9D7F7 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp4cQ9D7F7 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.56□□□□□ -0.08
Chmp4cQ9D7F7 Snora73a-201ENSMUST00000082453 205 ntBASIC14.56□□□□□ -0.08
Chmp4cQ9D7F7 Gm4735-201ENSMUST00000138679 1302 ntBASIC14.56□□□□□ -0.08
Chmp4cQ9D7F7 Gm5855-201ENSMUST00000200240 1305 ntBASIC14.56□□□□□ -0.08
Chmp4cQ9D7F7 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp4cQ9D7F7 Gm12846-201ENSMUST00000120431 1373 ntBASIC14.56□□□□□ -0.08
Chmp4cQ9D7F7 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Chmp4cQ9D7F7 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp4cQ9D7F7 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC14.56□□□□□ -0.08
Chmp4cQ9D7F7 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Chmp4cQ9D7F7 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp4cQ9D7F7 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp4cQ9D7F7 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp4cQ9D7F7 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp4cQ9D7F7 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp4cQ9D7F7 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp4cQ9D7F7 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Chmp4cQ9D7F7 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp4cQ9D7F7 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp4cQ9D7F7 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC14.55□□□□□ -0.08
Chmp4cQ9D7F7 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp4cQ9D7F7 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp4cQ9D7F7 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp4cQ9D7F7 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Chmp4cQ9D7F7 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Chmp4cQ9D7F7 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp4cQ9D7F7 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp4cQ9D7F7 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp4cQ9D7F7 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp4cQ9D7F7 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC14.55□□□□□ -0.08
Chmp4cQ9D7F7 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Chmp4cQ9D7F7 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC14.55□□□□□ -0.08
Chmp4cQ9D7F7 Gm13316-201ENSMUST00000140537 691 ntBASIC14.55□□□□□ -0.08
Chmp4cQ9D7F7 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp4cQ9D7F7 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC14.55□□□□□ -0.08
Chmp4cQ9D7F7 Gm45784-201ENSMUST00000188360 142 ntBASIC14.55□□□□□ -0.08
Chmp4cQ9D7F7 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC14.55□□□□□ -0.08
Chmp4cQ9D7F7 Gm18304-201ENSMUST00000189162 546 ntBASIC14.55□□□□□ -0.08
Chmp4cQ9D7F7 Gm5850-201ENSMUST00000192923 1206 ntBASIC14.55□□□□□ -0.08
Chmp4cQ9D7F7 Gm6007-201ENSMUST00000208170 823 ntBASIC14.55□□□□□ -0.08
Chmp4cQ9D7F7 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC14.55□□□□□ -0.08
Chmp4cQ9D7F7 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp4cQ9D7F7 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Chmp4cQ9D7F7 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Chmp4cQ9D7F7 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp4cQ9D7F7 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC14.55□□□□□ -0.08
Chmp4cQ9D7F7 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp4cQ9D7F7 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp4cQ9D7F7 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp4cQ9D7F7 Gm9361-201ENSMUST00000198695 1507 ntBASIC14.55□□□□□ -0.08
Chmp4cQ9D7F7 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Chmp4cQ9D7F7 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp4cQ9D7F7 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC14.55□□□□□ -0.08
Chmp4cQ9D7F7 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Chmp4cQ9D7F7 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp4cQ9D7F7 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp4cQ9D7F7 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp4cQ9D7F7 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp4cQ9D7F7 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp4cQ9D7F7 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp4cQ9D7F7 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp4cQ9D7F7 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Chmp4cQ9D7F7 Gm13736-201ENSMUST00000119272 253 ntBASIC14.54□□□□□ -0.08
Chmp4cQ9D7F7 Gm15824-201ENSMUST00000119516 955 ntBASIC14.54□□□□□ -0.08
Chmp4cQ9D7F7 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC14.54□□□□□ -0.08
Chmp4cQ9D7F7 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp4cQ9D7F7 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp4cQ9D7F7 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC14.54□□□□□ -0.08
Chmp4cQ9D7F7 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp4cQ9D7F7 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp4cQ9D7F7 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Chmp4cQ9D7F7 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.54□□□□□ -0.08
Chmp4cQ9D7F7 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC14.54□□□□□ -0.08
Chmp4cQ9D7F7 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp4cQ9D7F7 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC14.54□□□□□ -0.08
Chmp4cQ9D7F7 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp4cQ9D7F7 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp4cQ9D7F7 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp4cQ9D7F7 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Chmp4cQ9D7F7 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp4cQ9D7F7 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp4cQ9D7F7 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Chmp4cQ9D7F7 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp4cQ9D7F7 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Chmp4cQ9D7F7 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp4cQ9D7F7 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp4cQ9D7F7 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp4cQ9D7F7 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp4cQ9D7F7 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC14.53□□□□□ -0.08
Chmp4cQ9D7F7 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp4cQ9D7F7 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Chmp4cQ9D7F7 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp4cQ9D7F7 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC14.53□□□□□ -0.08
Chmp4cQ9D7F7 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp4cQ9D7F7 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp4cQ9D7F7 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms