Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Stag1Q9D3E6 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Stag1Q9D3E6 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Stag1Q9D3E6 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Stag1Q9D3E6 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Stag1Q9D3E6 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Stag1Q9D3E6 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Stag1Q9D3E6 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Stag1Q9D3E6 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Stag1Q9D3E6 AC125108.1-201ENSMUST00000218986 2330 ntBASIC14.5□□□□□ -0.09
Stag1Q9D3E6 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Stag1Q9D3E6 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Stag1Q9D3E6 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Stag1Q9D3E6 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Stag1Q9D3E6 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Stag1Q9D3E6 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
Stag1Q9D3E6 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC14.5□□□□□ -0.09
Stag1Q9D3E6 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC14.5□□□□□ -0.09
Stag1Q9D3E6 Gm2965-201ENSMUST00000198365 343 ntBASIC14.5□□□□□ -0.09
Stag1Q9D3E6 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC14.5□□□□□ -0.09
Stag1Q9D3E6 AC098716.1-201ENSMUST00000213527 703 ntBASIC14.5□□□□□ -0.09
Stag1Q9D3E6 AC125486.1-201ENSMUST00000218701 320 ntBASIC14.5□□□□□ -0.09
Stag1Q9D3E6 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Stag1Q9D3E6 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Stag1Q9D3E6 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Stag1Q9D3E6 Ginm1-202ENSMUST00000065124 300 ntBASIC14.5□□□□□ -0.09
Stag1Q9D3E6 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Stag1Q9D3E6 Adra1a-206ENSMUST00000225182 2337 ntBASIC14.5□□□□□ -0.09
Stag1Q9D3E6 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Stag1Q9D3E6 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Stag1Q9D3E6 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Stag1Q9D3E6 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC14.5□□□□□ -0.09
Stag1Q9D3E6 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Stag1Q9D3E6 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Stag1Q9D3E6 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Stag1Q9D3E6 Gm44758-201ENSMUST00000206096 2068 ntBASIC14.5□□□□□ -0.09
Stag1Q9D3E6 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Stag1Q9D3E6 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Stag1Q9D3E6 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Stag1Q9D3E6 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Stag1Q9D3E6 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Stag1Q9D3E6 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Stag1Q9D3E6 Gm42706-201ENSMUST00000199733 1910 ntBASIC14.49□□□□□ -0.09
Stag1Q9D3E6 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Stag1Q9D3E6 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Stag1Q9D3E6 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.49□□□□□ -0.09
Stag1Q9D3E6 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Stag1Q9D3E6 Gm15131-201ENSMUST00000119124 595 ntBASIC14.49□□□□□ -0.09
Stag1Q9D3E6 Gm8566-201ENSMUST00000120174 465 ntBASIC14.49□□□□□ -0.09
Stag1Q9D3E6 Gm14247-201ENSMUST00000120950 237 ntBASIC14.49□□□□□ -0.09
Stag1Q9D3E6 Gm13461-201ENSMUST00000120980 662 ntBASIC14.49□□□□□ -0.09
Stag1Q9D3E6 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC14.49□□□□□ -0.09
Stag1Q9D3E6 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC14.49□□□□□ -0.09
Stag1Q9D3E6 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC14.49□□□□□ -0.09
Stag1Q9D3E6 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC14.49□□□□□ -0.09
Stag1Q9D3E6 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC14.49□□□□□ -0.09
Stag1Q9D3E6 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC14.49□□□□□ -0.09
Stag1Q9D3E6 Gm8956-201ENSMUST00000203939 825 ntBASIC14.49□□□□□ -0.09
Stag1Q9D3E6 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC14.49□□□□□ -0.09
Stag1Q9D3E6 Gm5051-201ENSMUST00000204085 485 ntBASIC14.49□□□□□ -0.09
Stag1Q9D3E6 Gm6905-201ENSMUST00000205729 511 ntBASIC14.49□□□□□ -0.09
Stag1Q9D3E6 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC14.49□□□□□ -0.09
Stag1Q9D3E6 AC154849.4-201ENSMUST00000224868 365 ntBASIC14.49□□□□□ -0.09
Stag1Q9D3E6 Gm9826-201ENSMUST00000029124 1299 ntBASIC14.49□□□□□ -0.09
Stag1Q9D3E6 Gm10288-201ENSMUST00000084614 537 ntBASIC14.49□□□□□ -0.09
Stag1Q9D3E6 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC14.49□□□□□ -0.09
Stag1Q9D3E6 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC14.49□□□□□ -0.09
Stag1Q9D3E6 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Stag1Q9D3E6 Gm44292-201ENSMUST00000205194 2364 ntBASIC14.49□□□□□ -0.09
Stag1Q9D3E6 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Stag1Q9D3E6 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Stag1Q9D3E6 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Stag1Q9D3E6 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Stag1Q9D3E6 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Stag1Q9D3E6 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Stag1Q9D3E6 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
Stag1Q9D3E6 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Stag1Q9D3E6 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.48□□□□□ -0.09
Stag1Q9D3E6 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Stag1Q9D3E6 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Stag1Q9D3E6 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Stag1Q9D3E6 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Stag1Q9D3E6 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Stag1Q9D3E6 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
Stag1Q9D3E6 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Stag1Q9D3E6 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC14.48□□□□□ -0.09
Stag1Q9D3E6 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Stag1Q9D3E6 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC14.48□□□□□ -0.09
Stag1Q9D3E6 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC14.48□□□□□ -0.09
Stag1Q9D3E6 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Stag1Q9D3E6 Gm19459-201ENSMUST00000176240 835 ntBASIC14.48□□□□□ -0.09
Stag1Q9D3E6 Gm28686-201ENSMUST00000187404 609 ntBASIC14.48□□□□□ -0.09
Stag1Q9D3E6 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Stag1Q9D3E6 AC141438.2-201ENSMUST00000215068 271 ntBASIC14.48□□□□□ -0.09
Stag1Q9D3E6 AC135114.1-201ENSMUST00000228682 270 ntBASIC14.48□□□□□ -0.09
Stag1Q9D3E6 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Stag1Q9D3E6 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Stag1Q9D3E6 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Stag1Q9D3E6 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Stag1Q9D3E6 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms