Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Snf8Q9CZ28 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Snf8Q9CZ28 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Snf8Q9CZ28 Gm10268-201ENSMUST00000085340 555 ntBASIC12.53□□□□□ -0.4
Snf8Q9CZ28 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Snf8Q9CZ28 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.53□□□□□ -0.4
Snf8Q9CZ28 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Snf8Q9CZ28 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Snf8Q9CZ28 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Snf8Q9CZ28 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Snf8Q9CZ28 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Snf8Q9CZ28 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.53□□□□□ -0.4
Snf8Q9CZ28 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Snf8Q9CZ28 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Snf8Q9CZ28 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Snf8Q9CZ28 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Snf8Q9CZ28 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Snf8Q9CZ28 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Snf8Q9CZ28 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Snf8Q9CZ28 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Snf8Q9CZ28 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Snf8Q9CZ28 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Snf8Q9CZ28 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.52□□□□□ -0.4
Snf8Q9CZ28 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Snf8Q9CZ28 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Snf8Q9CZ28 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Snf8Q9CZ28 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Snf8Q9CZ28 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Snf8Q9CZ28 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Snf8Q9CZ28 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Snf8Q9CZ28 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Snf8Q9CZ28 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Snf8Q9CZ28 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.52□□□□□ -0.41
Snf8Q9CZ28 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.52□□□□□ -0.41
Snf8Q9CZ28 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Snf8Q9CZ28 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Snf8Q9CZ28 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Snf8Q9CZ28 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.41
Snf8Q9CZ28 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Snf8Q9CZ28 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Snf8Q9CZ28 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Snf8Q9CZ28 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Snf8Q9CZ28 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.52□□□□□ -0.41
Snf8Q9CZ28 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.52□□□□□ -0.41
Snf8Q9CZ28 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.52□□□□□ -0.41
Snf8Q9CZ28 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Snf8Q9CZ28 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Snf8Q9CZ28 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Snf8Q9CZ28 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Snf8Q9CZ28 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Snf8Q9CZ28 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.52□□□□□ -0.41
Snf8Q9CZ28 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Snf8Q9CZ28 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Snf8Q9CZ28 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Snf8Q9CZ28 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Snf8Q9CZ28 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Snf8Q9CZ28 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Snf8Q9CZ28 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Snf8Q9CZ28 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Snf8Q9CZ28 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Snf8Q9CZ28 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Snf8Q9CZ28 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Snf8Q9CZ28 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Snf8Q9CZ28 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Snf8Q9CZ28 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Gm13736-201ENSMUST00000119272 253 ntBASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Gm18584-201ENSMUST00000203098 964 ntBASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Gm7561-201ENSMUST00000211203 886 ntBASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Gm10076-201ENSMUST00000073238 384 ntBASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Snf8Q9CZ28 Gm6091-201ENSMUST00000098307 165 ntBASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms