Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Ssr1Q9CY50 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Ssr1Q9CY50 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ssr1Q9CY50 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ssr1Q9CY50 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ssr1Q9CY50 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ssr1Q9CY50 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ssr1Q9CY50 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ssr1Q9CY50 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ssr1Q9CY50 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ssr1Q9CY50 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ssr1Q9CY50 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ssr1Q9CY50 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ssr1Q9CY50 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ssr1Q9CY50 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ssr1Q9CY50 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC13.27□□□□□ -0.28
Ssr1Q9CY50 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ssr1Q9CY50 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.27□□□□□ -0.28
Ssr1Q9CY50 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ssr1Q9CY50 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Ssr1Q9CY50 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ssr1Q9CY50 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Ssr1Q9CY50 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ssr1Q9CY50 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ssr1Q9CY50 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Ssr1Q9CY50 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ssr1Q9CY50 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ssr1Q9CY50 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ssr1Q9CY50 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.27□□□□□ -0.29
Ssr1Q9CY50 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ssr1Q9CY50 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.27□□□□□ -0.29
Ssr1Q9CY50 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.27□□□□□ -0.29
Ssr1Q9CY50 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.27□□□□□ -0.29
Ssr1Q9CY50 Rmrp-201ENSMUST00000157463 271 ntBASIC13.27□□□□□ -0.29
Ssr1Q9CY50 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ssr1Q9CY50 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.27□□□□□ -0.29
Ssr1Q9CY50 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.27□□□□□ -0.29
Ssr1Q9CY50 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.27□□□□□ -0.29
Ssr1Q9CY50 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ssr1Q9CY50 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ssr1Q9CY50 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Ssr1Q9CY50 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.27□□□□□ -0.29
Ssr1Q9CY50 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ssr1Q9CY50 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ssr1Q9CY50 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ssr1Q9CY50 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ssr1Q9CY50 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.27□□□□□ -0.29
Ssr1Q9CY50 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ssr1Q9CY50 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ssr1Q9CY50 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ssr1Q9CY50 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ssr1Q9CY50 4833418N02Rik-201ENSMUST00000137539 1820 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ssr1Q9CY50 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ssr1Q9CY50 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ssr1Q9CY50 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ssr1Q9CY50 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ssr1Q9CY50 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ssr1Q9CY50 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ssr1Q9CY50 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ssr1Q9CY50 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ssr1Q9CY50 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ssr1Q9CY50 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ssr1Q9CY50 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ssr1Q9CY50 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ssr1Q9CY50 Gm12502-201ENSMUST00000120197 444 ntBASIC13.26□□□□□ -0.29
Ssr1Q9CY50 Gm1335-201ENSMUST00000121653 386 ntBASIC13.26□□□□□ -0.29
Ssr1Q9CY50 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.26□□□□□ -0.29
Ssr1Q9CY50 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ssr1Q9CY50 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ssr1Q9CY50 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC13.26□□□□□ -0.29
Ssr1Q9CY50 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.26□□□□□ -0.29
Ssr1Q9CY50 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Ssr1Q9CY50 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ssr1Q9CY50 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ssr1Q9CY50 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.26□□□□□ -0.29
Ssr1Q9CY50 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.26□□□□□ -0.29
Ssr1Q9CY50 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ssr1Q9CY50 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.26□□□□□ -0.29
Ssr1Q9CY50 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.26□□□□□ -0.29
Ssr1Q9CY50 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.26□□□□□ -0.29
Ssr1Q9CY50 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ssr1Q9CY50 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Ssr1Q9CY50 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ssr1Q9CY50 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Ssr1Q9CY50 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Ssr1Q9CY50 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ssr1Q9CY50 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ssr1Q9CY50 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ssr1Q9CY50 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ssr1Q9CY50 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ssr1Q9CY50 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ssr1Q9CY50 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ssr1Q9CY50 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ssr1Q9CY50 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC13.26□□□□□ -0.29
Ssr1Q9CY50 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ssr1Q9CY50 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.25□□□□□ -0.29
Ssr1Q9CY50 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC13.25□□□□□ -0.29
Ssr1Q9CY50 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ssr1Q9CY50 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.25□□□□□ -0.29
Ssr1Q9CY50 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 98.1 ms