Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.49□□□□□ -0.41
Ddx47Q9CWX9 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.49□□□□□ -0.41
Ddx47Q9CWX9 Gm6218-201ENSMUST00000219812 628 ntBASIC12.49□□□□□ -0.41
Ddx47Q9CWX9 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx47Q9CWX9 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx47Q9CWX9 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx47Q9CWX9 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx47Q9CWX9 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx47Q9CWX9 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx47Q9CWX9 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx47Q9CWX9 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx47Q9CWX9 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx47Q9CWX9 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ddx47Q9CWX9 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx47Q9CWX9 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx47Q9CWX9 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx47Q9CWX9 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ddx47Q9CWX9 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx47Q9CWX9 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ddx47Q9CWX9 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx47Q9CWX9 Gm38292-201ENSMUST00000192646 3045 ntBASIC12.48□□□□□ -0.41
Ddx47Q9CWX9 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx47Q9CWX9 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.48□□□□□ -0.41
Ddx47Q9CWX9 Gm21939-201ENSMUST00000221137 2773 ntBASIC12.48□□□□□ -0.41
Ddx47Q9CWX9 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.48□□□□□ -0.41
Ddx47Q9CWX9 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ddx47Q9CWX9 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ddx47Q9CWX9 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx47Q9CWX9 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.48□□□□□ -0.41
Ddx47Q9CWX9 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx47Q9CWX9 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx47Q9CWX9 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx47Q9CWX9 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx47Q9CWX9 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx47Q9CWX9 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.48□□□□□ -0.41
Ddx47Q9CWX9 Gm12036-201ENSMUST00000120008 530 ntBASIC12.48□□□□□ -0.41
Ddx47Q9CWX9 Gm9083-201ENSMUST00000120423 819 ntBASIC12.48□□□□□ -0.41
Ddx47Q9CWX9 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.48□□□□□ -0.41
Ddx47Q9CWX9 Gm16215-201ENSMUST00000161990 637 ntBASIC12.48□□□□□ -0.41
Ddx47Q9CWX9 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx47Q9CWX9 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.48□□□□□ -0.41
Ddx47Q9CWX9 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.48□□□□□ -0.41
Ddx47Q9CWX9 Gm18304-201ENSMUST00000189162 546 ntBASIC12.48□□□□□ -0.41
Ddx47Q9CWX9 Gm28631-201ENSMUST00000190740 334 ntBASIC12.48□□□□□ -0.41
Ddx47Q9CWX9 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.48□□□□□ -0.41
Ddx47Q9CWX9 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ddx47Q9CWX9 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx47Q9CWX9 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx47Q9CWX9 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx47Q9CWX9 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx47Q9CWX9 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.48□□□□□ -0.41
Ddx47Q9CWX9 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx47Q9CWX9 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ddx47Q9CWX9 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx47Q9CWX9 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx47Q9CWX9 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx47Q9CWX9 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx47Q9CWX9 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ddx47Q9CWX9 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx47Q9CWX9 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.47□□□□□ -0.41
Ddx47Q9CWX9 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Ddx47Q9CWX9 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx47Q9CWX9 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx47Q9CWX9 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx47Q9CWX9 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12.47□□□□□ -0.41
Ddx47Q9CWX9 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx47Q9CWX9 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx47Q9CWX9 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx47Q9CWX9 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Ddx47Q9CWX9 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx47Q9CWX9 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx47Q9CWX9 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.47□□□□□ -0.41
Ddx47Q9CWX9 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx47Q9CWX9 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.47□□□□□ -0.41
Ddx47Q9CWX9 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.47□□□□□ -0.41
Ddx47Q9CWX9 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.47□□□□□ -0.41
Ddx47Q9CWX9 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.47□□□□□ -0.41
Ddx47Q9CWX9 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx47Q9CWX9 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx47Q9CWX9 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.47□□□□□ -0.41
Ddx47Q9CWX9 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.47□□□□□ -0.41
Ddx47Q9CWX9 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Ddx47Q9CWX9 Gm9136-201ENSMUST00000193368 454 ntBASIC12.47□□□□□ -0.41
Ddx47Q9CWX9 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.47□□□□□ -0.41
Ddx47Q9CWX9 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx47Q9CWX9 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Ddx47Q9CWX9 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx47Q9CWX9 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx47Q9CWX9 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC12.47□□□□□ -0.41
Ddx47Q9CWX9 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx47Q9CWX9 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx47Q9CWX9 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx47Q9CWX9 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Ddx47Q9CWX9 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ddx47Q9CWX9 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx47Q9CWX9 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx47Q9CWX9 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx47Q9CWX9 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC12.47□□□□□ -0.41
Ddx47Q9CWX9 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ddx47Q9CWX9 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms