Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smc3Q9CW03 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc3Q9CW03 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc3Q9CW03 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Smc3Q9CW03 Rab3c-202ENSMUST00000223922 2398 ntBASIC14.29□□□□□ -0.12
Smc3Q9CW03 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Smc3Q9CW03 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smc3Q9CW03 Gm42937-201ENSMUST00000197360 752 ntBASIC14.29□□□□□ -0.12
Smc3Q9CW03 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC14.29□□□□□ -0.12
Smc3Q9CW03 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc3Q9CW03 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC14.29□□□□□ -0.12
Smc3Q9CW03 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC14.29□□□□□ -0.12
Smc3Q9CW03 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.29□□□□□ -0.12
Smc3Q9CW03 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Smc3Q9CW03 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc3Q9CW03 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc3Q9CW03 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc3Q9CW03 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Smc3Q9CW03 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc3Q9CW03 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.29□□□□□ -0.12
Smc3Q9CW03 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Smc3Q9CW03 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc3Q9CW03 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smc3Q9CW03 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC14.29□□□□□ -0.12
Smc3Q9CW03 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smc3Q9CW03 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc3Q9CW03 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc3Q9CW03 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smc3Q9CW03 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC14.29□□□□□ -0.12
Smc3Q9CW03 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc3Q9CW03 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc3Q9CW03 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smc3Q9CW03 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC14.29□□□□□ -0.12
Smc3Q9CW03 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Smc3Q9CW03 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc3Q9CW03 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smc3Q9CW03 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC14.29□□□□□ -0.12
Smc3Q9CW03 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smc3Q9CW03 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smc3Q9CW03 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smc3Q9CW03 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smc3Q9CW03 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smc3Q9CW03 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smc3Q9CW03 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Smc3Q9CW03 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC14.28□□□□□ -0.12
Smc3Q9CW03 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smc3Q9CW03 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smc3Q9CW03 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Smc3Q9CW03 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smc3Q9CW03 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smc3Q9CW03 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC14.28□□□□□ -0.12
Smc3Q9CW03 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smc3Q9CW03 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC14.28□□□□□ -0.12
Smc3Q9CW03 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC14.28□□□□□ -0.12
Smc3Q9CW03 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smc3Q9CW03 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smc3Q9CW03 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smc3Q9CW03 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC14.28□□□□□ -0.12
Smc3Q9CW03 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Smc3Q9CW03 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC14.28□□□□□ -0.12
Smc3Q9CW03 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Smc3Q9CW03 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smc3Q9CW03 Gm27731-201ENSMUST00000185192 107 ntBASIC14.28□□□□□ -0.12
Smc3Q9CW03 Gm37201-201ENSMUST00000191845 523 ntBASIC14.28□□□□□ -0.12
Smc3Q9CW03 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Smc3Q9CW03 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smc3Q9CW03 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Smc3Q9CW03 AC154639.1-201ENSMUST00000224393 2849 ntBASIC14.28□□□□□ -0.12
Smc3Q9CW03 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smc3Q9CW03 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smc3Q9CW03 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smc3Q9CW03 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smc3Q9CW03 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Smc3Q9CW03 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smc3Q9CW03 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smc3Q9CW03 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smc3Q9CW03 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smc3Q9CW03 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smc3Q9CW03 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smc3Q9CW03 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Smc3Q9CW03 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smc3Q9CW03 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smc3Q9CW03 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Smc3Q9CW03 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smc3Q9CW03 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
Smc3Q9CW03 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smc3Q9CW03 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smc3Q9CW03 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smc3Q9CW03 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Smc3Q9CW03 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smc3Q9CW03 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Smc3Q9CW03 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smc3Q9CW03 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smc3Q9CW03 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smc3Q9CW03 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smc3Q9CW03 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smc3Q9CW03 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smc3Q9CW03 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Smc3Q9CW03 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smc3Q9CW03 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms