Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Retreg3Q9CQV4 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retreg3Q9CQV4 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retreg3Q9CQV4 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retreg3Q9CQV4 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retreg3Q9CQV4 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retreg3Q9CQV4 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.62□□□□□ -0.39
Retreg3Q9CQV4 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retreg3Q9CQV4 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Retreg3Q9CQV4 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retreg3Q9CQV4 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retreg3Q9CQV4 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Retreg3Q9CQV4 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retreg3Q9CQV4 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.62□□□□□ -0.39
Retreg3Q9CQV4 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.62□□□□□ -0.39
Retreg3Q9CQV4 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retreg3Q9CQV4 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Retreg3Q9CQV4 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Retreg3Q9CQV4 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.62□□□□□ -0.39
Retreg3Q9CQV4 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retreg3Q9CQV4 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retreg3Q9CQV4 Mir669l-201ENSMUST00000103771 98 ntBASIC12.62□□□□□ -0.39
Retreg3Q9CQV4 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retreg3Q9CQV4 Gm6023-201ENSMUST00000118217 606 ntBASIC12.62□□□□□ -0.39
Retreg3Q9CQV4 Gm15808-201ENSMUST00000119046 604 ntBASIC12.62□□□□□ -0.39
Retreg3Q9CQV4 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.62□□□□□ -0.39
Retreg3Q9CQV4 Gm14381-201ENSMUST00000122105 414 ntBASIC12.62□□□□□ -0.39
Retreg3Q9CQV4 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.62□□□□□ -0.39
Retreg3Q9CQV4 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retreg3Q9CQV4 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retreg3Q9CQV4 C030010L15Rik-201ENSMUST00000181465 715 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retreg3Q9CQV4 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retreg3Q9CQV4 Gm44405-201ENSMUST00000198952 126 ntBASIC12.62□□□□□ -0.39
Retreg3Q9CQV4 Gm43811-201ENSMUST00000202862 695 ntBASIC12.62□□□□□ -0.39
Retreg3Q9CQV4 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retreg3Q9CQV4 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.62□□□□□ -0.39
Retreg3Q9CQV4 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retreg3Q9CQV4 Gm20063-201ENSMUST00000220757 1089 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retreg3Q9CQV4 AC159293.2-201ENSMUST00000222289 424 ntBASIC12.62□□□□□ -0.39
Retreg3Q9CQV4 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retreg3Q9CQV4 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Retreg3Q9CQV4 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Retreg3Q9CQV4 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retreg3Q9CQV4 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retreg3Q9CQV4 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retreg3Q9CQV4 Gm10652-201ENSMUST00000199790 2622 ntBASIC12.62□□□□□ -0.39
Retreg3Q9CQV4 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retreg3Q9CQV4 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retreg3Q9CQV4 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retreg3Q9CQV4 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Retreg3Q9CQV4 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Retreg3Q9CQV4 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retreg3Q9CQV4 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retreg3Q9CQV4 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.61□□□□□ -0.39
Retreg3Q9CQV4 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retreg3Q9CQV4 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.61□□□□□ -0.39
Retreg3Q9CQV4 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retreg3Q9CQV4 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.61□□□□□ -0.39
Retreg3Q9CQV4 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retreg3Q9CQV4 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Retreg3Q9CQV4 Gm19210-201ENSMUST00000199562 1350 ntBASIC12.61□□□□□ -0.39
Retreg3Q9CQV4 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.61□□□□□ -0.39
Retreg3Q9CQV4 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.61□□□□□ -0.39
Retreg3Q9CQV4 Arl14ep-202ENSMUST00000093883 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retreg3Q9CQV4 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retreg3Q9CQV4 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Retreg3Q9CQV4 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.61□□□□□ -0.39
Retreg3Q9CQV4 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Retreg3Q9CQV4 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retreg3Q9CQV4 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retreg3Q9CQV4 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Retreg3Q9CQV4 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.61□□□□□ -0.39
Retreg3Q9CQV4 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Retreg3Q9CQV4 Gm25668-201ENSMUST00000157700 129 ntBASIC12.61□□□□□ -0.39
Retreg3Q9CQV4 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Retreg3Q9CQV4 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Retreg3Q9CQV4 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Retreg3Q9CQV4 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Retreg3Q9CQV4 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retreg3Q9CQV4 Gm9022-201ENSMUST00000182482 992 ntBASIC12.61□□□□□ -0.39
Retreg3Q9CQV4 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Retreg3Q9CQV4 Gm18539-201ENSMUST00000204745 1090 ntBASIC12.61□□□□□ -0.39
Retreg3Q9CQV4 Gm5904-201ENSMUST00000210286 865 ntBASIC12.61□□□□□ -0.39
Retreg3Q9CQV4 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.61□□□□□ -0.39
Retreg3Q9CQV4 AC156574.1-201ENSMUST00000227084 452 ntBASIC12.61□□□□□ -0.39
Retreg3Q9CQV4 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retreg3Q9CQV4 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Retreg3Q9CQV4 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Retreg3Q9CQV4 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Retreg3Q9CQV4 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retreg3Q9CQV4 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retreg3Q9CQV4 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Retreg3Q9CQV4 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retreg3Q9CQV4 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Retreg3Q9CQV4 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retreg3Q9CQV4 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retreg3Q9CQV4 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC12.61□□□□□ -0.39
Retreg3Q9CQV4 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retreg3Q9CQV4 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms