Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Gm5904-201ENSMUST00000210286 865 ntBASIC11.93□□□□□ -0.5
Trim16Q99PP9 Gm6013-201ENSMUST00000212264 699 ntBASIC11.93□□□□□ -0.5
Trim16Q99PP9 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.93□□□□□ -0.5
Trim16Q99PP9 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.93□□□□□ -0.5
Trim16Q99PP9 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.93□□□□□ -0.5
Trim16Q99PP9 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Trim16Q99PP9 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Trim16Q99PP9 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim16Q99PP9 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Trim16Q99PP9 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.93□□□□□ -0.5
Trim16Q99PP9 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim16Q99PP9 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim16Q99PP9 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim16Q99PP9 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim16Q99PP9 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim16Q99PP9 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim16Q99PP9 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim16Q99PP9 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim16Q99PP9 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Trim16Q99PP9 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trim16Q99PP9 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.93□□□□□ -0.5
Trim16Q99PP9 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim16Q99PP9 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim16Q99PP9 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim16Q99PP9 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim16Q99PP9 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim16Q99PP9 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trim16Q99PP9 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim16Q99PP9 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim16Q99PP9 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim16Q99PP9 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim16Q99PP9 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim16Q99PP9 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim16Q99PP9 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim16Q99PP9 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.92□□□□□ -0.5
Trim16Q99PP9 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.92□□□□□ -0.5
Trim16Q99PP9 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.92□□□□□ -0.5
Trim16Q99PP9 Gm13786-201ENSMUST00000122371 333 ntBASIC11.92□□□□□ -0.5
Trim16Q99PP9 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.92□□□□□ -0.5
Trim16Q99PP9 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim16Q99PP9 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.92□□□□□ -0.5
Trim16Q99PP9 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim16Q99PP9 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim16Q99PP9 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim16Q99PP9 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim16Q99PP9 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim16Q99PP9 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.92□□□□□ -0.5
Trim16Q99PP9 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.92□□□□□ -0.5
Trim16Q99PP9 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim16Q99PP9 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim16Q99PP9 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim16Q99PP9 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim16Q99PP9 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim16Q99PP9 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim16Q99PP9 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim16Q99PP9 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Trim16Q99PP9 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim16Q99PP9 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim16Q99PP9 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim16Q99PP9 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim16Q99PP9 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim16Q99PP9 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim16Q99PP9 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim16Q99PP9 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim16Q99PP9 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim16Q99PP9 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim16Q99PP9 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trim16Q99PP9 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim16Q99PP9 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim16Q99PP9 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim16Q99PP9 Cog3-203ENSMUST00000227473 4197 ntBASIC11.91□□□□□ -0.5
Trim16Q99PP9 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trim16Q99PP9 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim16Q99PP9 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim16Q99PP9 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim16Q99PP9 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim16Q99PP9 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim16Q99PP9 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.91□□□□□ -0.5
Trim16Q99PP9 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim16Q99PP9 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trim16Q99PP9 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim16Q99PP9 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim16Q99PP9 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim16Q99PP9 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.91□□□□□ -0.5
Trim16Q99PP9 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.91□□□□□ -0.5
Trim16Q99PP9 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim16Q99PP9 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.91□□□□□ -0.5
Trim16Q99PP9 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim16Q99PP9 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim16Q99PP9 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Trim16Q99PP9 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.91□□□□□ -0.5
Trim16Q99PP9 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim16Q99PP9 Gm7399-201ENSMUST00000032395 858 ntBASIC11.91□□□□□ -0.5
Trim16Q99PP9 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim16Q99PP9 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim16Q99PP9 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trim16Q99PP9 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim16Q99PP9 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim16Q99PP9 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trim16Q99PP9 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms