Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim33Q99PP7 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim33Q99PP7 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.17□□□□□ -0.46
Trim33Q99PP7 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim33Q99PP7 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim33Q99PP7 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trim33Q99PP7 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim33Q99PP7 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim33Q99PP7 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim33Q99PP7 Gm11893-201ENSMUST00000117829 491 ntBASIC12.17□□□□□ -0.46
Trim33Q99PP7 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Trim33Q99PP7 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.17□□□□□ -0.46
Trim33Q99PP7 Gm9022-201ENSMUST00000182482 992 ntBASIC12.17□□□□□ -0.46
Trim33Q99PP7 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.17□□□□□ -0.46
Trim33Q99PP7 Gm27243-201ENSMUST00000183964 521 ntBASIC12.17□□□□□ -0.46
Trim33Q99PP7 Gm28064-201ENSMUST00000185639 858 ntBASIC12.17□□□□□ -0.46
Trim33Q99PP7 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.17□□□□□ -0.46
Trim33Q99PP7 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.17□□□□□ -0.46
Trim33Q99PP7 Gm43438-201ENSMUST00000198133 379 ntBASIC12.17□□□□□ -0.46
Trim33Q99PP7 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.17□□□□□ -0.46
Trim33Q99PP7 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.17□□□□□ -0.46
Trim33Q99PP7 Gm6334-201ENSMUST00000207083 228 ntBASIC12.17□□□□□ -0.46
Trim33Q99PP7 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.17□□□□□ -0.46
Trim33Q99PP7 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.17□□□□□ -0.46
Trim33Q99PP7 Gm9368-201ENSMUST00000219348 831 ntBASIC12.17□□□□□ -0.46
Trim33Q99PP7 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.17□□□□□ -0.46
Trim33Q99PP7 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim33Q99PP7 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim33Q99PP7 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim33Q99PP7 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim33Q99PP7 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim33Q99PP7 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim33Q99PP7 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim33Q99PP7 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim33Q99PP7 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim33Q99PP7 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim33Q99PP7 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trim33Q99PP7 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim33Q99PP7 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.17□□□□□ -0.46
Trim33Q99PP7 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim33Q99PP7 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim33Q99PP7 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim33Q99PP7 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim33Q99PP7 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim33Q99PP7 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim33Q99PP7 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim33Q99PP7 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trim33Q99PP7 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim33Q99PP7 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim33Q99PP7 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim33Q99PP7 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.16□□□□□ -0.46
Trim33Q99PP7 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trim33Q99PP7 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.16□□□□□ -0.46
Trim33Q99PP7 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.16□□□□□ -0.46
Trim33Q99PP7 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim33Q99PP7 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.16□□□□□ -0.46
Trim33Q99PP7 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.16□□□□□ -0.46
Trim33Q99PP7 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trim33Q99PP7 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim33Q99PP7 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim33Q99PP7 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.16□□□□□ -0.46
Trim33Q99PP7 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim33Q99PP7 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim33Q99PP7 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim33Q99PP7 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim33Q99PP7 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trim33Q99PP7 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trim33Q99PP7 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trim33Q99PP7 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trim33Q99PP7 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trim33Q99PP7 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trim33Q99PP7 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trim33Q99PP7 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim33Q99PP7 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim33Q99PP7 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Trim33Q99PP7 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.16□□□□□ -0.46
Trim33Q99PP7 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.16□□□□□ -0.46
Trim33Q99PP7 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trim33Q99PP7 Gm27023-201ENSMUST00000182372 285 ntBASIC12.16□□□□□ -0.46
Trim33Q99PP7 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.16□□□□□ -0.46
Trim33Q99PP7 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.16□□□□□ -0.46
Trim33Q99PP7 Gm6007-201ENSMUST00000208170 823 ntBASIC12.16□□□□□ -0.46
Trim33Q99PP7 AC114573.1-201ENSMUST00000224120 1210 ntBASIC12.16□□□□□ -0.46
Trim33Q99PP7 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim33Q99PP7 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim33Q99PP7 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim33Q99PP7 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trim33Q99PP7 Map1b-203ENSMUST00000223725 2669 ntBASIC12.16□□□□□ -0.46
Trim33Q99PP7 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trim33Q99PP7 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim33Q99PP7 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trim33Q99PP7 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim33Q99PP7 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim33Q99PP7 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.16□□□□□ -0.46
Trim33Q99PP7 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.16□□□□□ -0.46
Trim33Q99PP7 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim33Q99PP7 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Trim33Q99PP7 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim33Q99PP7 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim33Q99PP7 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms