Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim8Q99PJ2 Gm24526-201ENSMUST00000082921 158 ntBASIC11.95□□□□□ -0.5
Trim8Q99PJ2 Gm24136-201ENSMUST00000083374 165 ntBASIC11.95□□□□□ -0.5
Trim8Q99PJ2 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim8Q99PJ2 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim8Q99PJ2 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim8Q99PJ2 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim8Q99PJ2 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim8Q99PJ2 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.95□□□□□ -0.5
Trim8Q99PJ2 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim8Q99PJ2 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Trim8Q99PJ2 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim8Q99PJ2 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim8Q99PJ2 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim8Q99PJ2 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim8Q99PJ2 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.95□□□□□ -0.5
Trim8Q99PJ2 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trim8Q99PJ2 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Trim8Q99PJ2 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim8Q99PJ2 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim8Q99PJ2 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim8Q99PJ2 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim8Q99PJ2 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim8Q99PJ2 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trim8Q99PJ2 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.94□□□□□ -0.5
Trim8Q99PJ2 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim8Q99PJ2 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trim8Q99PJ2 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Trim8Q99PJ2 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim8Q99PJ2 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim8Q99PJ2 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim8Q99PJ2 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.94□□□□□ -0.5
Trim8Q99PJ2 Gm43014-201ENSMUST00000198568 2443 ntBASIC11.94□□□□□ -0.5
Trim8Q99PJ2 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trim8Q99PJ2 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trim8Q99PJ2 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trim8Q99PJ2 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.94□□□□□ -0.5
Trim8Q99PJ2 Gm13315-201ENSMUST00000120376 991 ntBASIC11.94□□□□□ -0.5
Trim8Q99PJ2 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim8Q99PJ2 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.94□□□□□ -0.5
Trim8Q99PJ2 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.94□□□□□ -0.5
Trim8Q99PJ2 Gm44882-201ENSMUST00000205702 802 ntBASIC11.94□□□□□ -0.5
Trim8Q99PJ2 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.94□□□□□ -0.5
Trim8Q99PJ2 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.94□□□□□ -0.5
Trim8Q99PJ2 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.94□□□□□ -0.5
Trim8Q99PJ2 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim8Q99PJ2 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim8Q99PJ2 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim8Q99PJ2 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim8Q99PJ2 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.94□□□□□ -0.5
Trim8Q99PJ2 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim8Q99PJ2 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim8Q99PJ2 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim8Q99PJ2 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim8Q99PJ2 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trim8Q99PJ2 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim8Q99PJ2 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim8Q99PJ2 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim8Q99PJ2 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim8Q99PJ2 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim8Q99PJ2 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim8Q99PJ2 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trim8Q99PJ2 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim8Q99PJ2 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim8Q99PJ2 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim8Q99PJ2 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Trim8Q99PJ2 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.93□□□□□ -0.5
Trim8Q99PJ2 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.93□□□□□ -0.5
Trim8Q99PJ2 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim8Q99PJ2 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim8Q99PJ2 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim8Q99PJ2 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trim8Q99PJ2 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trim8Q99PJ2 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim8Q99PJ2 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim8Q99PJ2 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.93□□□□□ -0.5
Trim8Q99PJ2 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim8Q99PJ2 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.93□□□□□ -0.5
Trim8Q99PJ2 Gm11425-201ENSMUST00000119608 498 ntBASIC11.93□□□□□ -0.5
Trim8Q99PJ2 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.93□□□□□ -0.5
Trim8Q99PJ2 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim8Q99PJ2 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim8Q99PJ2 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim8Q99PJ2 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.93□□□□□ -0.5
Trim8Q99PJ2 Gm24644-201ENSMUST00000157114 139 ntBASIC11.93□□□□□ -0.5
Trim8Q99PJ2 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.93□□□□□ -0.5
Trim8Q99PJ2 Gm35960-201ENSMUST00000202712 767 ntBASIC11.93□□□□□ -0.5
Trim8Q99PJ2 Gm18062-201ENSMUST00000208020 547 ntBASIC11.93□□□□□ -0.5
Trim8Q99PJ2 Gm18055-201ENSMUST00000208254 547 ntBASIC11.93□□□□□ -0.5
Trim8Q99PJ2 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.93□□□□□ -0.5
Trim8Q99PJ2 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim8Q99PJ2 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim8Q99PJ2 Gm9396-201ENSMUST00000076703 567 ntBASIC11.93□□□□□ -0.5
Trim8Q99PJ2 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim8Q99PJ2 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim8Q99PJ2 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim8Q99PJ2 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim8Q99PJ2 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim8Q99PJ2 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trim8Q99PJ2 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 96 ms