Protein–RNA interactions for Protein: Q99N13

Hdac9, Histone deacetylase 9, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac9Q99N13 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hdac9Q99N13 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hdac9Q99N13 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Hdac9Q99N13 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hdac9Q99N13 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hdac9Q99N13 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hdac9Q99N13 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Hdac9Q99N13 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hdac9Q99N13 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hdac9Q99N13 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hdac9Q99N13 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hdac9Q99N13 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hdac9Q99N13 AC158355.1-201ENSMUST00000215895 1705 ntBASIC14.3□□□□□ -0.12
Hdac9Q99N13 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hdac9Q99N13 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hdac9Q99N13 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hdac9Q99N13 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Hdac9Q99N13 Gm13916-201ENSMUST00000117368 628 ntBASIC14.3□□□□□ -0.12
Hdac9Q99N13 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC14.3□□□□□ -0.12
Hdac9Q99N13 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hdac9Q99N13 Gm6485-201ENSMUST00000160676 439 ntBASIC14.3□□□□□ -0.12
Hdac9Q99N13 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC14.3□□□□□ -0.12
Hdac9Q99N13 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hdac9Q99N13 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC14.3□□□□□ -0.12
Hdac9Q99N13 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hdac9Q99N13 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hdac9Q99N13 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Hdac9Q99N13 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hdac9Q99N13 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Hdac9Q99N13 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hdac9Q99N13 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hdac9Q99N13 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.3□□□□□ -0.12
Hdac9Q99N13 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hdac9Q99N13 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hdac9Q99N13 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hdac9Q99N13 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hdac9Q99N13 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.3□□□□□ -0.12
Hdac9Q99N13 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Hdac9Q99N13 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.3□□□□□ -0.12
Hdac9Q99N13 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Hdac9Q99N13 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Hdac9Q99N13 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Hdac9Q99N13 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Hdac9Q99N13 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hdac9Q99N13 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac9Q99N13 Gm43267-201ENSMUST00000199664 1796 ntBASIC14.29□□□□□ -0.12
Hdac9Q99N13 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac9Q99N13 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac9Q99N13 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.29□□□□□ -0.12
Hdac9Q99N13 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac9Q99N13 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac9Q99N13 AC169511.2-201ENSMUST00000226674 2063 ntBASIC14.29□□□□□ -0.12
Hdac9Q99N13 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac9Q99N13 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac9Q99N13 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac9Q99N13 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac9Q99N13 Gm15207-201ENSMUST00000119259 442 ntBASIC14.29□□□□□ -0.12
Hdac9Q99N13 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC14.29□□□□□ -0.12
Hdac9Q99N13 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC14.29□□□□□ -0.12
Hdac9Q99N13 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC14.29□□□□□ -0.12
Hdac9Q99N13 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac9Q99N13 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac9Q99N13 Gm23153-201ENSMUST00000175323 313 ntBASIC14.29□□□□□ -0.12
Hdac9Q99N13 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac9Q99N13 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC14.29□□□□□ -0.12
Hdac9Q99N13 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac9Q99N13 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac9Q99N13 Gm2553-201ENSMUST00000215986 605 ntBASIC14.29□□□□□ -0.12
Hdac9Q99N13 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC14.29□□□□□ -0.12
Hdac9Q99N13 AC129219.2-201ENSMUST00000224324 701 ntBASIC14.29□□□□□ -0.12
Hdac9Q99N13 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Hdac9Q99N13 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Hdac9Q99N13 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac9Q99N13 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac9Q99N13 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac9Q99N13 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac9Q99N13 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac9Q99N13 Gm9361-201ENSMUST00000198695 1507 ntBASIC14.29□□□□□ -0.12
Hdac9Q99N13 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac9Q99N13 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Hdac9Q99N13 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC14.29□□□□□ -0.12
Hdac9Q99N13 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.29□□□□□ -0.12
Hdac9Q99N13 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac9Q99N13 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Hdac9Q99N13 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac9Q99N13 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac9Q99N13 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac9Q99N13 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hdac9Q99N13 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hdac9Q99N13 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Hdac9Q99N13 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Hdac9Q99N13 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hdac9Q99N13 Gm22920-201ENSMUST00000102175 109 ntBASIC14.28□□□□□ -0.12
Hdac9Q99N13 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Hdac9Q99N13 Gm14193-201ENSMUST00000105067 153 ntBASIC14.28□□□□□ -0.12
Hdac9Q99N13 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC14.28□□□□□ -0.12
Hdac9Q99N13 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Hdac9Q99N13 Selenot-ps-201ENSMUST00000119098 593 ntBASIC14.28□□□□□ -0.12
Hdac9Q99N13 Gm15725-201ENSMUST00000119947 1090 ntBASIC14.28□□□□□ -0.12
Hdac9Q99N13 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms