Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Rnf111Q99ML9 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf111Q99ML9 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf111Q99ML9 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Rnf111Q99ML9 Gm22058-201ENSMUST00000083393 310 ntBASIC11.82□□□□□ -0.52
Rnf111Q99ML9 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Rnf111Q99ML9 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf111Q99ML9 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf111Q99ML9 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf111Q99ML9 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf111Q99ML9 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf111Q99ML9 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.82□□□□□ -0.52
Rnf111Q99ML9 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf111Q99ML9 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf111Q99ML9 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.82□□□□□ -0.52
Rnf111Q99ML9 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf111Q99ML9 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.82□□□□□ -0.52
Rnf111Q99ML9 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf111Q99ML9 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf111Q99ML9 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.82□□□□□ -0.52
Rnf111Q99ML9 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf111Q99ML9 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf111Q99ML9 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf111Q99ML9 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf111Q99ML9 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.81□□□□□ -0.52
Rnf111Q99ML9 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf111Q99ML9 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf111Q99ML9 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf111Q99ML9 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf111Q99ML9 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf111Q99ML9 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Rnf111Q99ML9 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf111Q99ML9 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf111Q99ML9 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf111Q99ML9 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Rnf111Q99ML9 Gm5187-201ENSMUST00000117317 991 ntBASIC11.81□□□□□ -0.52
Rnf111Q99ML9 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.81□□□□□ -0.52
Rnf111Q99ML9 Gm8062-201ENSMUST00000139696 444 ntBASIC11.81□□□□□ -0.52
Rnf111Q99ML9 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.81□□□□□ -0.52
Rnf111Q99ML9 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.81□□□□□ -0.52
Rnf111Q99ML9 Gm43371-201ENSMUST00000202838 1031 ntBASIC11.81□□□□□ -0.52
Rnf111Q99ML9 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.81□□□□□ -0.52
Rnf111Q99ML9 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf111Q99ML9 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.81□□□□□ -0.52
Rnf111Q99ML9 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf111Q99ML9 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.81□□□□□ -0.52
Rnf111Q99ML9 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Rnf111Q99ML9 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf111Q99ML9 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf111Q99ML9 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.81□□□□□ -0.52
Rnf111Q99ML9 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf111Q99ML9 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.81□□□□□ -0.52
Rnf111Q99ML9 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.81□□□□□ -0.52
Rnf111Q99ML9 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf111Q99ML9 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf111Q99ML9 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf111Q99ML9 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf111Q99ML9 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf111Q99ML9 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Rnf111Q99ML9 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf111Q99ML9 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Rnf111Q99ML9 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Rnf111Q99ML9 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf111Q99ML9 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf111Q99ML9 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Rnf111Q99ML9 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf111Q99ML9 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.8□□□□□ -0.52
Rnf111Q99ML9 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf111Q99ML9 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf111Q99ML9 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf111Q99ML9 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf111Q99ML9 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.8□□□□□ -0.52
Rnf111Q99ML9 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf111Q99ML9 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf111Q99ML9 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf111Q99ML9 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf111Q99ML9 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.8□□□□□ -0.52
Rnf111Q99ML9 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Rnf111Q99ML9 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf111Q99ML9 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf111Q99ML9 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.8□□□□□ -0.52
Rnf111Q99ML9 Gm37424-201ENSMUST00000191727 561 ntBASIC11.8□□□□□ -0.52
Rnf111Q99ML9 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.8□□□□□ -0.52
Rnf111Q99ML9 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.8□□□□□ -0.52
Rnf111Q99ML9 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.8□□□□□ -0.52
Rnf111Q99ML9 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf111Q99ML9 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf111Q99ML9 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Rnf111Q99ML9 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Rnf111Q99ML9 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Rnf111Q99ML9 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf111Q99ML9 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf111Q99ML9 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Rnf111Q99ML9 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.8□□□□□ -0.52
Rnf111Q99ML9 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.8□□□□□ -0.52
Rnf111Q99ML9 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf111Q99ML9 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf111Q99ML9 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Rnf111Q99ML9 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf111Q99ML9 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms