Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gm37513-201ENSMUST00000194830 2268 ntBASIC14.97□□□□□ -0.01
RtcbQ99LF4 Gm38378-201ENSMUST00000195153 2268 ntBASIC14.97□□□□□ -0.01
RtcbQ99LF4 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC14.97□□□□□ -0.01
RtcbQ99LF4 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RtcbQ99LF4 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
RtcbQ99LF4 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
RtcbQ99LF4 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
RtcbQ99LF4 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RtcbQ99LF4 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC14.97□□□□□ -0.01
RtcbQ99LF4 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC14.97□□□□□ -0.01
RtcbQ99LF4 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RtcbQ99LF4 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC14.97□□□□□ -0.01
RtcbQ99LF4 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
RtcbQ99LF4 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RtcbQ99LF4 Gm9116-201ENSMUST00000192400 1018 ntBASIC14.97□□□□□ -0.01
RtcbQ99LF4 Gm9111-201ENSMUST00000219394 709 ntBASIC14.97□□□□□ -0.01
RtcbQ99LF4 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RtcbQ99LF4 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RtcbQ99LF4 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RtcbQ99LF4 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RtcbQ99LF4 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RtcbQ99LF4 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
RtcbQ99LF4 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RtcbQ99LF4 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RtcbQ99LF4 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RtcbQ99LF4 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RtcbQ99LF4 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RtcbQ99LF4 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC14.97□□□□□ -0.01
RtcbQ99LF4 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RtcbQ99LF4 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RtcbQ99LF4 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RtcbQ99LF4 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RtcbQ99LF4 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
RtcbQ99LF4 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RtcbQ99LF4 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RtcbQ99LF4 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
RtcbQ99LF4 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
RtcbQ99LF4 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RtcbQ99LF4 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RtcbQ99LF4 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RtcbQ99LF4 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC14.96□□□□□ -0.01
RtcbQ99LF4 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RtcbQ99LF4 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RtcbQ99LF4 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
RtcbQ99LF4 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RtcbQ99LF4 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
RtcbQ99LF4 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC14.96□□□□□ -0.01
RtcbQ99LF4 Gm12990-201ENSMUST00000120372 468 ntBASIC14.96□□□□□ -0.01
RtcbQ99LF4 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC14.96□□□□□ -0.01
RtcbQ99LF4 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RtcbQ99LF4 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RtcbQ99LF4 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RtcbQ99LF4 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RtcbQ99LF4 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
RtcbQ99LF4 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC14.96□□□□□ -0.01
RtcbQ99LF4 Gm8325-201ENSMUST00000099086 453 ntBASIC14.96□□□□□ -0.01
RtcbQ99LF4 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RtcbQ99LF4 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RtcbQ99LF4 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RtcbQ99LF4 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RtcbQ99LF4 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RtcbQ99LF4 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RtcbQ99LF4 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RtcbQ99LF4 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
RtcbQ99LF4 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
RtcbQ99LF4 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RtcbQ99LF4 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
RtcbQ99LF4 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RtcbQ99LF4 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RtcbQ99LF4 AC166836.1-201ENSMUST00000219933 1795 ntBASIC14.96□□□□□ -0.02
RtcbQ99LF4 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RtcbQ99LF4 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.96□□□□□ -0.02
RtcbQ99LF4 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
RtcbQ99LF4 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RtcbQ99LF4 Gm36970-201ENSMUST00000193688 1859 ntBASIC14.95□□□□□ -0.02
RtcbQ99LF4 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RtcbQ99LF4 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RtcbQ99LF4 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
RtcbQ99LF4 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RtcbQ99LF4 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RtcbQ99LF4 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RtcbQ99LF4 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RtcbQ99LF4 Gm12856-201ENSMUST00000119471 1293 ntBASIC14.95□□□□□ -0.02
RtcbQ99LF4 Gm15610-201ENSMUST00000120584 195 ntBASIC14.95□□□□□ -0.02
RtcbQ99LF4 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC14.95□□□□□ -0.02
RtcbQ99LF4 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RtcbQ99LF4 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC14.95□□□□□ -0.02
RtcbQ99LF4 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC14.95□□□□□ -0.02
RtcbQ99LF4 Gm35713-201ENSMUST00000210516 199 ntBASIC14.95□□□□□ -0.02
RtcbQ99LF4 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RtcbQ99LF4 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RtcbQ99LF4 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RtcbQ99LF4 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RtcbQ99LF4 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RtcbQ99LF4 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RtcbQ99LF4 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RtcbQ99LF4 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RtcbQ99LF4 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
RtcbQ99LF4 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RtcbQ99LF4 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms