Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdha8Q91Y12 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdha8Q91Y12 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Pcdha8Q91Y12 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdha8Q91Y12 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.87□□□□□ -0.51
Pcdha8Q91Y12 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.87□□□□□ -0.51
Pcdha8Q91Y12 Gm4986-201ENSMUST00000119731 549 ntBASIC11.87□□□□□ -0.51
Pcdha8Q91Y12 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.87□□□□□ -0.51
Pcdha8Q91Y12 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.87□□□□□ -0.51
Pcdha8Q91Y12 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Pcdha8Q91Y12 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.87□□□□□ -0.51
Pcdha8Q91Y12 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.87□□□□□ -0.51
Pcdha8Q91Y12 Gm43630-201ENSMUST00000201550 776 ntBASIC11.87□□□□□ -0.51
Pcdha8Q91Y12 Olfr284-202ENSMUST00000206647 966 ntBASIC11.87□□□□□ -0.51
Pcdha8Q91Y12 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.87□□□□□ -0.51
Pcdha8Q91Y12 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.87□□□□□ -0.51
Pcdha8Q91Y12 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdha8Q91Y12 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Pcdha8Q91Y12 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Pcdha8Q91Y12 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdha8Q91Y12 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdha8Q91Y12 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Pcdha8Q91Y12 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdha8Q91Y12 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.87□□□□□ -0.51
Pcdha8Q91Y12 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdha8Q91Y12 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Pcdha8Q91Y12 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdha8Q91Y12 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdha8Q91Y12 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdha8Q91Y12 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdha8Q91Y12 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Pcdha8Q91Y12 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdha8Q91Y12 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdha8Q91Y12 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdha8Q91Y12 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdha8Q91Y12 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdha8Q91Y12 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdha8Q91Y12 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdha8Q91Y12 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdha8Q91Y12 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdha8Q91Y12 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Pcdha8Q91Y12 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Pcdha8Q91Y12 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdha8Q91Y12 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Pcdha8Q91Y12 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdha8Q91Y12 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Pcdha8Q91Y12 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.86□□□□□ -0.51
Pcdha8Q91Y12 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdha8Q91Y12 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.86□□□□□ -0.51
Pcdha8Q91Y12 Gm25043-201ENSMUST00000158604 212 ntBASIC11.86□□□□□ -0.51
Pcdha8Q91Y12 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Pcdha8Q91Y12 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdha8Q91Y12 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Pcdha8Q91Y12 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.86□□□□□ -0.51
Pcdha8Q91Y12 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.86□□□□□ -0.51
Pcdha8Q91Y12 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdha8Q91Y12 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdha8Q91Y12 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdha8Q91Y12 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Pcdha8Q91Y12 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.86□□□□□ -0.51
Pcdha8Q91Y12 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdha8Q91Y12 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdha8Q91Y12 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdha8Q91Y12 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Pcdha8Q91Y12 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdha8Q91Y12 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdha8Q91Y12 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdha8Q91Y12 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.86□□□□□ -0.51
Pcdha8Q91Y12 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Pcdha8Q91Y12 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdha8Q91Y12 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdha8Q91Y12 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.85□□□□□ -0.51
Pcdha8Q91Y12 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdha8Q91Y12 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Pcdha8Q91Y12 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Pcdha8Q91Y12 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
Pcdha8Q91Y12 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.85□□□□□ -0.51
Pcdha8Q91Y12 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.85□□□□□ -0.51
Pcdha8Q91Y12 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Pcdha8Q91Y12 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdha8Q91Y12 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.85□□□□□ -0.51
Pcdha8Q91Y12 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdha8Q91Y12 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdha8Q91Y12 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Pcdha8Q91Y12 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdha8Q91Y12 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdha8Q91Y12 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdha8Q91Y12 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdha8Q91Y12 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdha8Q91Y12 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdha8Q91Y12 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdha8Q91Y12 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdha8Q91Y12 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdha8Q91Y12 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Pcdha8Q91Y12 Gm13297-201ENSMUST00000120205 934 ntBASIC11.85□□□□□ -0.51
Pcdha8Q91Y12 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdha8Q91Y12 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.85□□□□□ -0.51
Pcdha8Q91Y12 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Pcdha8Q91Y12 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.85□□□□□ -0.51
Pcdha8Q91Y12 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms