Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC14.22□□□□□ -0.13
Pcdhb22Q91XZ8 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC14.22□□□□□ -0.13
Pcdhb22Q91XZ8 Gm45224-201ENSMUST00000208203 414 ntBASIC14.22□□□□□ -0.13
Pcdhb22Q91XZ8 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC14.22□□□□□ -0.13
Pcdhb22Q91XZ8 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Pcdhb22Q91XZ8 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb22Q91XZ8 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb22Q91XZ8 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb22Q91XZ8 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb22Q91XZ8 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb22Q91XZ8 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC14.22□□□□□ -0.13
Pcdhb22Q91XZ8 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb22Q91XZ8 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb22Q91XZ8 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC14.22□□□□□ -0.13
Pcdhb22Q91XZ8 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Pcdhb22Q91XZ8 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb22Q91XZ8 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb22Q91XZ8 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb22Q91XZ8 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb22Q91XZ8 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Pcdhb22Q91XZ8 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb22Q91XZ8 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb22Q91XZ8 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.21□□□□□ -0.13
Pcdhb22Q91XZ8 Gm8522-201ENSMUST00000118416 1929 ntBASIC14.21□□□□□ -0.13
Pcdhb22Q91XZ8 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb22Q91XZ8 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb22Q91XZ8 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC14.21□□□□□ -0.13
Pcdhb22Q91XZ8 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb22Q91XZ8 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb22Q91XZ8 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC14.21□□□□□ -0.13
Pcdhb22Q91XZ8 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb22Q91XZ8 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb22Q91XZ8 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb22Q91XZ8 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb22Q91XZ8 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb22Q91XZ8 Gm13996-201ENSMUST00000118456 430 ntBASIC14.21□□□□□ -0.13
Pcdhb22Q91XZ8 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC14.21□□□□□ -0.13
Pcdhb22Q91XZ8 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb22Q91XZ8 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb22Q91XZ8 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb22Q91XZ8 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC14.21□□□□□ -0.13
Pcdhb22Q91XZ8 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb22Q91XZ8 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC14.21□□□□□ -0.13
Pcdhb22Q91XZ8 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC14.21□□□□□ -0.13
Pcdhb22Q91XZ8 CT571245.2-201ENSMUST00000218421 305 ntBASIC14.21□□□□□ -0.13
Pcdhb22Q91XZ8 AC114573.1-201ENSMUST00000224120 1210 ntBASIC14.21□□□□□ -0.13
Pcdhb22Q91XZ8 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb22Q91XZ8 Gm5455-201ENSMUST00000058710 715 ntBASIC14.21□□□□□ -0.13
Pcdhb22Q91XZ8 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb22Q91XZ8 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb22Q91XZ8 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb22Q91XZ8 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb22Q91XZ8 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb22Q91XZ8 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb22Q91XZ8 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC14.21□□□□□ -0.13
Pcdhb22Q91XZ8 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhb22Q91XZ8 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhb22Q91XZ8 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhb22Q91XZ8 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC14.21□□□□□ -0.14
Pcdhb22Q91XZ8 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhb22Q91XZ8 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb22Q91XZ8 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Pcdhb22Q91XZ8 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Pcdhb22Q91XZ8 Map1b-203ENSMUST00000223725 2669 ntBASIC14.2□□□□□ -0.14
Pcdhb22Q91XZ8 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb22Q91XZ8 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb22Q91XZ8 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb22Q91XZ8 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb22Q91XZ8 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb22Q91XZ8 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb22Q91XZ8 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb22Q91XZ8 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Pcdhb22Q91XZ8 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb22Q91XZ8 Gm11511-201ENSMUST00000118146 540 ntBASIC14.2□□□□□ -0.14
Pcdhb22Q91XZ8 Gm12813-201ENSMUST00000119615 902 ntBASIC14.2□□□□□ -0.14
Pcdhb22Q91XZ8 AV099323-201ENSMUST00000124336 921 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb22Q91XZ8 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb22Q91XZ8 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb22Q91XZ8 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdhb22Q91XZ8 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC14.2□□□□□ -0.14
Pcdhb22Q91XZ8 Gm18893-201ENSMUST00000198416 943 ntBASIC14.2□□□□□ -0.14
Pcdhb22Q91XZ8 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC14.2□□□□□ -0.14
Pcdhb22Q91XZ8 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdhb22Q91XZ8 AC153929.1-201ENSMUST00000219009 303 ntBASIC14.2□□□□□ -0.14
Pcdhb22Q91XZ8 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb22Q91XZ8 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Pcdhb22Q91XZ8 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb22Q91XZ8 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb22Q91XZ8 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb22Q91XZ8 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb22Q91XZ8 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb22Q91XZ8 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb22Q91XZ8 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb22Q91XZ8 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Pcdhb22Q91XZ8 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb22Q91XZ8 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb22Q91XZ8 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdhb22Q91XZ8 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb22Q91XZ8 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb22Q91XZ8 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms