Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Usp3Q91W36 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.65□□□□□ -0.38
Usp3Q91W36 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.65□□□□□ -0.38
Usp3Q91W36 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Usp3Q91W36 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Usp3Q91W36 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp3Q91W36 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.65□□□□□ -0.38
Usp3Q91W36 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp3Q91W36 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Usp3Q91W36 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Usp3Q91W36 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp3Q91W36 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.65□□□□□ -0.38
Usp3Q91W36 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usp3Q91W36 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.65□□□□□ -0.38
Usp3Q91W36 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Usp3Q91W36 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Usp3Q91W36 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Usp3Q91W36 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp3Q91W36 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp3Q91W36 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Usp3Q91W36 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Usp3Q91W36 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp3Q91W36 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp3Q91W36 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Usp3Q91W36 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Usp3Q91W36 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Usp3Q91W36 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp3Q91W36 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Usp3Q91W36 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp3Q91W36 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.64□□□□□ -0.39
Usp3Q91W36 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usp3Q91W36 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usp3Q91W36 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.64□□□□□ -0.39
Usp3Q91W36 Gm43787-201ENSMUST00000197792 1037 ntBASIC12.64□□□□□ -0.39
Usp3Q91W36 Gm8913-201ENSMUST00000209491 641 ntBASIC12.64□□□□□ -0.39
Usp3Q91W36 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.64□□□□□ -0.39
Usp3Q91W36 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usp3Q91W36 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp3Q91W36 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp3Q91W36 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Usp3Q91W36 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp3Q91W36 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usp3Q91W36 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usp3Q91W36 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usp3Q91W36 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usp3Q91W36 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp3Q91W36 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usp3Q91W36 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usp3Q91W36 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usp3Q91W36 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp3Q91W36 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp3Q91W36 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Usp3Q91W36 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usp3Q91W36 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usp3Q91W36 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp3Q91W36 Gm42995-201ENSMUST00000197047 1330 ntBASIC12.63□□□□□ -0.39
Usp3Q91W36 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp3Q91W36 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp3Q91W36 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp3Q91W36 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Usp3Q91W36 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp3Q91W36 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Usp3Q91W36 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp3Q91W36 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Usp3Q91W36 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Usp3Q91W36 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp3Q91W36 Gm11989-201ENSMUST00000117240 672 ntBASIC12.63□□□□□ -0.39
Usp3Q91W36 Gm11362-201ENSMUST00000118838 850 ntBASIC12.63□□□□□ -0.39
Usp3Q91W36 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.63□□□□□ -0.39
Usp3Q91W36 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.63□□□□□ -0.39
Usp3Q91W36 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.63□□□□□ -0.39
Usp3Q91W36 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.63□□□□□ -0.39
Usp3Q91W36 Rprl1-201ENSMUST00000158050 327 ntBASIC12.63□□□□□ -0.39
Usp3Q91W36 Gm16112-201ENSMUST00000159075 382 ntBASIC12.63□□□□□ -0.39
Usp3Q91W36 Dctd-205ENSMUST00000174278 799 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Usp3Q91W36 Gm4034-201ENSMUST00000187674 480 ntBASIC12.63□□□□□ -0.39
Usp3Q91W36 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.63□□□□□ -0.39
Usp3Q91W36 Gm44262-201ENSMUST00000204969 372 ntBASIC12.63□□□□□ -0.39
Usp3Q91W36 Gm44845-201ENSMUST00000208773 335 ntBASIC12.63□□□□□ -0.39
Usp3Q91W36 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp3Q91W36 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.63□□□□□ -0.39
Usp3Q91W36 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.63□□□□□ -0.39
Usp3Q91W36 AC131743.3-201ENSMUST00000222099 662 ntBASIC12.63□□□□□ -0.39
Usp3Q91W36 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp3Q91W36 Mir433-201ENSMUST00000093564 124 ntBASIC12.63□□□□□ -0.39
Usp3Q91W36 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Usp3Q91W36 Gm38262-201ENSMUST00000194760 1382 ntBASIC12.63□□□□□ -0.39
Usp3Q91W36 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.63□□□□□ -0.39
Usp3Q91W36 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.63□□□□□ -0.39
Usp3Q91W36 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp3Q91W36 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usp3Q91W36 Gm10652-201ENSMUST00000199790 2622 ntBASIC12.63□□□□□ -0.39
Usp3Q91W36 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.63□□□□□ -0.39
Usp3Q91W36 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Usp3Q91W36 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.63□□□□□ -0.39
Usp3Q91W36 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Usp3Q91W36 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
Usp3Q91W36 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Usp3Q91W36 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Usp3Q91W36 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms