Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Ddx41Q91VN6 Gm28882-201ENSMUST00000185504 314 ntBASIC14.02□□□□□ -0.17
Ddx41Q91VN6 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx41Q91VN6 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx41Q91VN6 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx41Q91VN6 Gm10076-201ENSMUST00000073238 384 ntBASIC14.02□□□□□ -0.17
Ddx41Q91VN6 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx41Q91VN6 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx41Q91VN6 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx41Q91VN6 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx41Q91VN6 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx41Q91VN6 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx41Q91VN6 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Ddx41Q91VN6 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx41Q91VN6 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx41Q91VN6 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx41Q91VN6 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx41Q91VN6 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx41Q91VN6 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC14.02□□□□□ -0.17
Ddx41Q91VN6 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx41Q91VN6 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ddx41Q91VN6 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx41Q91VN6 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx41Q91VN6 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx41Q91VN6 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx41Q91VN6 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC14.01□□□□□ -0.17
Ddx41Q91VN6 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx41Q91VN6 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx41Q91VN6 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx41Q91VN6 Gm43721-201ENSMUST00000199677 2313 ntBASIC14.01□□□□□ -0.17
Ddx41Q91VN6 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx41Q91VN6 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ddx41Q91VN6 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ddx41Q91VN6 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ddx41Q91VN6 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx41Q91VN6 Gm12314-201ENSMUST00000118104 538 ntBASIC14.01□□□□□ -0.17
Ddx41Q91VN6 Gm14208-201ENSMUST00000119645 678 ntBASIC14.01□□□□□ -0.17
Ddx41Q91VN6 Gm14277-201ENSMUST00000121195 360 ntBASIC14.01□□□□□ -0.17
Ddx41Q91VN6 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx41Q91VN6 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC14.01□□□□□ -0.17
Ddx41Q91VN6 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC14.01□□□□□ -0.17
Ddx41Q91VN6 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx41Q91VN6 Gm18753-201ENSMUST00000201000 566 ntBASIC14.01□□□□□ -0.17
Ddx41Q91VN6 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC14.01□□□□□ -0.17
Ddx41Q91VN6 Gm44124-201ENSMUST00000204159 472 ntBASIC14.01□□□□□ -0.17
Ddx41Q91VN6 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC14.01□□□□□ -0.17
Ddx41Q91VN6 Gm45691-201ENSMUST00000206905 1120 ntBASIC14.01□□□□□ -0.17
Ddx41Q91VN6 Gm44651-201ENSMUST00000207343 372 ntBASIC14.01□□□□□ -0.17
Ddx41Q91VN6 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Ddx41Q91VN6 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC14.01□□□□□ -0.17
Ddx41Q91VN6 AC166344.1-202ENSMUST00000224139 234 ntBASIC14.01□□□□□ -0.17
Ddx41Q91VN6 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx41Q91VN6 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Ddx41Q91VN6 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx41Q91VN6 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx41Q91VN6 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx41Q91VN6 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx41Q91VN6 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx41Q91VN6 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx41Q91VN6 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx41Q91VN6 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx41Q91VN6 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx41Q91VN6 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx41Q91VN6 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Ddx41Q91VN6 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx41Q91VN6 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx41Q91VN6 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx41Q91VN6 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx41Q91VN6 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx41Q91VN6 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx41Q91VN6 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx41Q91VN6 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx41Q91VN6 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx41Q91VN6 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx41Q91VN6 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC14□□□□□ -0.17
Ddx41Q91VN6 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC14□□□□□ -0.17
Ddx41Q91VN6 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Ddx41Q91VN6 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx41Q91VN6 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC14□□□□□ -0.17
Ddx41Q91VN6 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx41Q91VN6 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ddx41Q91VN6 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx41Q91VN6 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx41Q91VN6 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx41Q91VN6 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ddx41Q91VN6 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ddx41Q91VN6 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Ddx41Q91VN6 Gm12015-201ENSMUST00000117065 843 ntBASIC14□□□□□ -0.17
Ddx41Q91VN6 Gm13996-201ENSMUST00000118456 430 ntBASIC14□□□□□ -0.17
Ddx41Q91VN6 Gm5070-201ENSMUST00000177599 862 ntBASIC14□□□□□ -0.17
Ddx41Q91VN6 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ddx41Q91VN6 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx41Q91VN6 Gzmn-202ENSMUST00000225535 989 ntBASIC14□□□□□ -0.17
Ddx41Q91VN6 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ddx41Q91VN6 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx41Q91VN6 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx41Q91VN6 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Ddx41Q91VN6 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx41Q91VN6 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx41Q91VN6 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms