Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
TraipQ8VIG6 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TraipQ8VIG6 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TraipQ8VIG6 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TraipQ8VIG6 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.04□□□□□ -0.32
TraipQ8VIG6 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TraipQ8VIG6 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
TraipQ8VIG6 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TraipQ8VIG6 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TraipQ8VIG6 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
TraipQ8VIG6 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TraipQ8VIG6 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.04□□□□□ -0.32
TraipQ8VIG6 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
TraipQ8VIG6 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
TraipQ8VIG6 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC13.04□□□□□ -0.32
TraipQ8VIG6 Gm7851-201ENSMUST00000117574 323 ntBASIC13.04□□□□□ -0.32
TraipQ8VIG6 Gm5419-201ENSMUST00000119301 527 ntBASIC13.04□□□□□ -0.32
TraipQ8VIG6 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
TraipQ8VIG6 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC13.04□□□□□ -0.32
TraipQ8VIG6 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC13.04□□□□□ -0.32
TraipQ8VIG6 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TraipQ8VIG6 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC13.04□□□□□ -0.32
TraipQ8VIG6 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TraipQ8VIG6 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
TraipQ8VIG6 Gm18393-201ENSMUST00000208349 1131 ntBASIC13.04□□□□□ -0.32
TraipQ8VIG6 Gm807-202ENSMUST00000224929 408 ntBASIC13.04□□□□□ -0.32
TraipQ8VIG6 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
TraipQ8VIG6 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
TraipQ8VIG6 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.04□□□□□ -0.32
TraipQ8VIG6 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
TraipQ8VIG6 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TraipQ8VIG6 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
TraipQ8VIG6 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.04□□□□□ -0.32
TraipQ8VIG6 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
TraipQ8VIG6 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TraipQ8VIG6 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TraipQ8VIG6 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TraipQ8VIG6 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TraipQ8VIG6 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TraipQ8VIG6 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.04□□□□□ -0.32
TraipQ8VIG6 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
TraipQ8VIG6 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
TraipQ8VIG6 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.04□□□□□ -0.32
TraipQ8VIG6 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TraipQ8VIG6 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TraipQ8VIG6 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TraipQ8VIG6 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TraipQ8VIG6 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TraipQ8VIG6 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
TraipQ8VIG6 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TraipQ8VIG6 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TraipQ8VIG6 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TraipQ8VIG6 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TraipQ8VIG6 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TraipQ8VIG6 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TraipQ8VIG6 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TraipQ8VIG6 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TraipQ8VIG6 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TraipQ8VIG6 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TraipQ8VIG6 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TraipQ8VIG6 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TraipQ8VIG6 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TraipQ8VIG6 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TraipQ8VIG6 Gm9164-201ENSMUST00000118700 1014 ntBASIC13.03□□□□□ -0.32
TraipQ8VIG6 Gm6506-201ENSMUST00000119775 1136 ntBASIC13.03□□□□□ -0.32
TraipQ8VIG6 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TraipQ8VIG6 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TraipQ8VIG6 Gm8100-201ENSMUST00000182906 988 ntBASIC13.03□□□□□ -0.32
TraipQ8VIG6 Ighv1-48-201ENSMUST00000191795 294 ntBASIC13.03□□□□□ -0.32
TraipQ8VIG6 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TraipQ8VIG6 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC13.03□□□□□ -0.32
TraipQ8VIG6 Gm43947-201ENSMUST00000203019 959 ntBASIC13.03□□□□□ -0.32
TraipQ8VIG6 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC13.03□□□□□ -0.32
TraipQ8VIG6 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC13.03□□□□□ -0.32
TraipQ8VIG6 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TraipQ8VIG6 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TraipQ8VIG6 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
TraipQ8VIG6 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.03□□□□□ -0.32
TraipQ8VIG6 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TraipQ8VIG6 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TraipQ8VIG6 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TraipQ8VIG6 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
TraipQ8VIG6 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TraipQ8VIG6 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TraipQ8VIG6 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TraipQ8VIG6 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TraipQ8VIG6 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TraipQ8VIG6 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TraipQ8VIG6 Gm37593-201ENSMUST00000191669 3254 ntBASIC13.03□□□□□ -0.32
TraipQ8VIG6 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.03□□□□□ -0.32
TraipQ8VIG6 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TraipQ8VIG6 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
TraipQ8VIG6 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
TraipQ8VIG6 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TraipQ8VIG6 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TraipQ8VIG6 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
TraipQ8VIG6 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
TraipQ8VIG6 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TraipQ8VIG6 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC13.02□□□□□ -0.32
TraipQ8VIG6 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms