Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx39aQ8VDW0 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx39aQ8VDW0 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Ddx39aQ8VDW0 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC13.5□□□□□ -0.25
Ddx39aQ8VDW0 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx39aQ8VDW0 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.5□□□□□ -0.25
Ddx39aQ8VDW0 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx39aQ8VDW0 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx39aQ8VDW0 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC13.5□□□□□ -0.25
Ddx39aQ8VDW0 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx39aQ8VDW0 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx39aQ8VDW0 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx39aQ8VDW0 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx39aQ8VDW0 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx39aQ8VDW0 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx39aQ8VDW0 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx39aQ8VDW0 Gm6335-201ENSMUST00000118081 1194 ntBASIC13.5□□□□□ -0.25
Ddx39aQ8VDW0 Gm7816-201ENSMUST00000119884 1194 ntBASIC13.5□□□□□ -0.25
Ddx39aQ8VDW0 Gm15542-201ENSMUST00000121585 1194 ntBASIC13.5□□□□□ -0.25
Ddx39aQ8VDW0 Gm12164-201ENSMUST00000121695 551 ntBASIC13.5□□□□□ -0.25
Ddx39aQ8VDW0 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx39aQ8VDW0 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx39aQ8VDW0 Gm19353-201ENSMUST00000184561 445 ntBASIC13.5□□□□□ -0.25
Ddx39aQ8VDW0 Gm28686-201ENSMUST00000187404 609 ntBASIC13.5□□□□□ -0.25
Ddx39aQ8VDW0 Gm3332-201ENSMUST00000189337 928 ntBASIC13.5□□□□□ -0.25
Ddx39aQ8VDW0 Gm42682-201ENSMUST00000198349 1265 ntBASIC13.5□□□□□ -0.25
Ddx39aQ8VDW0 Gm7207-201ENSMUST00000211575 1067 ntBASIC13.5□□□□□ -0.25
Ddx39aQ8VDW0 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx39aQ8VDW0 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx39aQ8VDW0 Gm1821-202ENSMUST00000227415 750 ntBASIC13.5□□□□□ -0.25
Ddx39aQ8VDW0 AC154276.3-201ENSMUST00000227643 998 ntBASIC13.5□□□□□ -0.25
Ddx39aQ8VDW0 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx39aQ8VDW0 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx39aQ8VDW0 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx39aQ8VDW0 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Ddx39aQ8VDW0 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx39aQ8VDW0 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.5□□□□□ -0.25
Ddx39aQ8VDW0 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx39aQ8VDW0 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx39aQ8VDW0 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Ddx39aQ8VDW0 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx39aQ8VDW0 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Ddx39aQ8VDW0 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx39aQ8VDW0 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx39aQ8VDW0 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx39aQ8VDW0 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
Ddx39aQ8VDW0 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx39aQ8VDW0 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx39aQ8VDW0 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx39aQ8VDW0 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ddx39aQ8VDW0 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx39aQ8VDW0 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx39aQ8VDW0 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx39aQ8VDW0 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx39aQ8VDW0 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Ddx39aQ8VDW0 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx39aQ8VDW0 Gm12165-201ENSMUST00000117047 342 ntBASIC13.49□□□□□ -0.25
Ddx39aQ8VDW0 Gm11509-201ENSMUST00000117358 325 ntBASIC13.49□□□□□ -0.25
Ddx39aQ8VDW0 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC13.49□□□□□ -0.25
Ddx39aQ8VDW0 Gm15432-201ENSMUST00000121106 195 ntBASIC13.49□□□□□ -0.25
Ddx39aQ8VDW0 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC13.49□□□□□ -0.25
Ddx39aQ8VDW0 Gm10051-201ENSMUST00000145209 414 ntBASIC13.49□□□□□ -0.25
Ddx39aQ8VDW0 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC13.49□□□□□ -0.25
Ddx39aQ8VDW0 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Ddx39aQ8VDW0 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx39aQ8VDW0 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Ddx39aQ8VDW0 Gm9211-201ENSMUST00000182882 975 ntBASIC13.49□□□□□ -0.25
Ddx39aQ8VDW0 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx39aQ8VDW0 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC13.49□□□□□ -0.25
Ddx39aQ8VDW0 Gm4157-201ENSMUST00000211647 679 ntBASIC13.49□□□□□ -0.25
Ddx39aQ8VDW0 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx39aQ8VDW0 Ntng1-201ENSMUST00000051253 327 ntBASIC13.49□□□□□ -0.25
Ddx39aQ8VDW0 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx39aQ8VDW0 Mir219a-1-201ENSMUST00000083621 110 ntBASIC13.49□□□□□ -0.25
Ddx39aQ8VDW0 Gm10702-201ENSMUST00000098929 1268 ntBASIC13.49□□□□□ -0.25
Ddx39aQ8VDW0 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx39aQ8VDW0 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx39aQ8VDW0 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx39aQ8VDW0 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx39aQ8VDW0 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx39aQ8VDW0 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ddx39aQ8VDW0 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx39aQ8VDW0 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx39aQ8VDW0 AC154671.1-201ENSMUST00000228617 1578 ntBASIC13.49□□□□□ -0.25
Ddx39aQ8VDW0 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC13.48□□□□□ -0.25
Ddx39aQ8VDW0 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx39aQ8VDW0 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.48□□□□□ -0.25
Ddx39aQ8VDW0 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx39aQ8VDW0 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx39aQ8VDW0 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx39aQ8VDW0 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx39aQ8VDW0 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ddx39aQ8VDW0 Mir680-2-201ENSMUST00000102163 110 ntBASIC13.48□□□□□ -0.25
Ddx39aQ8VDW0 Gm23251-201ENSMUST00000103773 110 ntBASIC13.48□□□□□ -0.25
Ddx39aQ8VDW0 Gm6506-201ENSMUST00000119775 1136 ntBASIC13.48□□□□□ -0.25
Ddx39aQ8VDW0 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC13.48□□□□□ -0.25
Ddx39aQ8VDW0 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx39aQ8VDW0 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx39aQ8VDW0 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC13.48□□□□□ -0.25
Ddx39aQ8VDW0 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms