Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.64□□□□□ -0.07
Ccdc9Q8VC31 Gm29245-201ENSMUST00000187332 1416 ntBASIC14.64□□□□□ -0.07
Ccdc9Q8VC31 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc9Q8VC31 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc9Q8VC31 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Ccdc9Q8VC31 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Ccdc9Q8VC31 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.64□□□□□ -0.07
Ccdc9Q8VC31 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.64□□□□□ -0.07
Ccdc9Q8VC31 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc9Q8VC31 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc9Q8VC31 A630052C17Rik-201ENSMUST00000129876 2203 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc9Q8VC31 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ccdc9Q8VC31 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc9Q8VC31 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC14.63□□□□□ -0.07
Ccdc9Q8VC31 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc9Q8VC31 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc9Q8VC31 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Ccdc9Q8VC31 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc9Q8VC31 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc9Q8VC31 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc9Q8VC31 Cog3-203ENSMUST00000227473 4197 ntBASIC14.63□□□□□ -0.07
Ccdc9Q8VC31 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Ccdc9Q8VC31 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc9Q8VC31 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.63□□□□□ -0.07
Ccdc9Q8VC31 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc9Q8VC31 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
Ccdc9Q8VC31 Gm4804-201ENSMUST00000182234 999 ntBASIC14.63□□□□□ -0.07
Ccdc9Q8VC31 Gm5425-201ENSMUST00000214125 459 ntBASIC14.63□□□□□ -0.07
Ccdc9Q8VC31 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc9Q8VC31 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc9Q8VC31 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc9Q8VC31 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc9Q8VC31 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc9Q8VC31 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Ccdc9Q8VC31 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Ccdc9Q8VC31 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc9Q8VC31 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc9Q8VC31 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
Ccdc9Q8VC31 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Ccdc9Q8VC31 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc9Q8VC31 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc9Q8VC31 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc9Q8VC31 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc9Q8VC31 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Ccdc9Q8VC31 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc9Q8VC31 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc9Q8VC31 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc9Q8VC31 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc9Q8VC31 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc9Q8VC31 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccdc9Q8VC31 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc9Q8VC31 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc9Q8VC31 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc9Q8VC31 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc9Q8VC31 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc9Q8VC31 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc9Q8VC31 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc9Q8VC31 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Ccdc9Q8VC31 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC14.62□□□□□ -0.07
Ccdc9Q8VC31 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ccdc9Q8VC31 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ccdc9Q8VC31 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Ccdc9Q8VC31 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc9Q8VC31 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC14.62□□□□□ -0.07
Ccdc9Q8VC31 Gm12585-201ENSMUST00000117307 290 ntBASIC14.62□□□□□ -0.07
Ccdc9Q8VC31 Gm15393-201ENSMUST00000120499 219 ntBASIC14.62□□□□□ -0.07
Ccdc9Q8VC31 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC14.62□□□□□ -0.07
Ccdc9Q8VC31 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc9Q8VC31 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc9Q8VC31 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc9Q8VC31 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc9Q8VC31 Mir6956-201ENSMUST00000183598 62 ntBASIC14.62□□□□□ -0.07
Ccdc9Q8VC31 Gm17837-201ENSMUST00000186435 985 ntBASIC14.62□□□□□ -0.07
Ccdc9Q8VC31 Gm44369-201ENSMUST00000204543 2175 ntBASIC14.62□□□□□ -0.07
Ccdc9Q8VC31 AC098716.1-201ENSMUST00000213527 703 ntBASIC14.62□□□□□ -0.07
Ccdc9Q8VC31 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc9Q8VC31 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc9Q8VC31 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc9Q8VC31 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc9Q8VC31 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc9Q8VC31 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Ccdc9Q8VC31 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc9Q8VC31 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc9Q8VC31 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC14.62□□□□□ -0.07
Ccdc9Q8VC31 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Ccdc9Q8VC31 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc9Q8VC31 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.62□□□□□ -0.07
Ccdc9Q8VC31 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc9Q8VC31 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc9Q8VC31 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc9Q8VC31 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccdc9Q8VC31 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC14.62□□□□□ -0.07
Ccdc9Q8VC31 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Ccdc9Q8VC31 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ccdc9Q8VC31 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc9Q8VC31 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ccdc9Q8VC31 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.61□□□□□ -0.07
Ccdc9Q8VC31 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc9Q8VC31 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccdc9Q8VC31 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms