Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps39Q8R5L3 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Vps39Q8R5L3 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps39Q8R5L3 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps39Q8R5L3 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps39Q8R5L3 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps39Q8R5L3 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps39Q8R5L3 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps39Q8R5L3 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps39Q8R5L3 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps39Q8R5L3 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.19□□□□□ -0.46
Vps39Q8R5L3 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vps39Q8R5L3 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps39Q8R5L3 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.19□□□□□ -0.46
Vps39Q8R5L3 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.19□□□□□ -0.46
Vps39Q8R5L3 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.19□□□□□ -0.46
Vps39Q8R5L3 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Vps39Q8R5L3 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vps39Q8R5L3 Gm27514-201ENSMUST00000183692 110 ntBASIC12.19□□□□□ -0.46
Vps39Q8R5L3 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.19□□□□□ -0.46
Vps39Q8R5L3 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.19□□□□□ -0.46
Vps39Q8R5L3 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.19□□□□□ -0.46
Vps39Q8R5L3 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps39Q8R5L3 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.19□□□□□ -0.46
Vps39Q8R5L3 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Vps39Q8R5L3 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps39Q8R5L3 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps39Q8R5L3 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vps39Q8R5L3 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vps39Q8R5L3 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.19□□□□□ -0.46
Vps39Q8R5L3 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.19□□□□□ -0.46
Vps39Q8R5L3 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps39Q8R5L3 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.19□□□□□ -0.46
Vps39Q8R5L3 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Vps39Q8R5L3 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps39Q8R5L3 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps39Q8R5L3 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Vps39Q8R5L3 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps39Q8R5L3 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps39Q8R5L3 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.19□□□□□ -0.46
Vps39Q8R5L3 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Vps39Q8R5L3 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vps39Q8R5L3 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps39Q8R5L3 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps39Q8R5L3 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps39Q8R5L3 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps39Q8R5L3 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps39Q8R5L3 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps39Q8R5L3 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps39Q8R5L3 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps39Q8R5L3 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Vps39Q8R5L3 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vps39Q8R5L3 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.18□□□□□ -0.46
Vps39Q8R5L3 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.18□□□□□ -0.46
Vps39Q8R5L3 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vps39Q8R5L3 Mir1982-201ENSMUST00000157368 74 ntBASIC12.18□□□□□ -0.46
Vps39Q8R5L3 Snora78-201ENSMUST00000158630 128 ntBASIC12.18□□□□□ -0.46
Vps39Q8R5L3 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.18□□□□□ -0.46
Vps39Q8R5L3 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Vps39Q8R5L3 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vps39Q8R5L3 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.18□□□□□ -0.46
Vps39Q8R5L3 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.18□□□□□ -0.46
Vps39Q8R5L3 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps39Q8R5L3 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps39Q8R5L3 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Vps39Q8R5L3 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps39Q8R5L3 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Vps39Q8R5L3 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps39Q8R5L3 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Vps39Q8R5L3 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps39Q8R5L3 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vps39Q8R5L3 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps39Q8R5L3 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Vps39Q8R5L3 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.18□□□□□ -0.46
Vps39Q8R5L3 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vps39Q8R5L3 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.18□□□□□ -0.46
Vps39Q8R5L3 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Vps39Q8R5L3 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vps39Q8R5L3 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Vps39Q8R5L3 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Vps39Q8R5L3 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps39Q8R5L3 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vps39Q8R5L3 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Vps39Q8R5L3 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Vps39Q8R5L3 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps39Q8R5L3 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps39Q8R5L3 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps39Q8R5L3 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Vps39Q8R5L3 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Vps39Q8R5L3 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps39Q8R5L3 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps39Q8R5L3 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vps39Q8R5L3 Gm11425-201ENSMUST00000119608 498 ntBASIC12.17□□□□□ -0.46
Vps39Q8R5L3 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.17□□□□□ -0.46
Vps39Q8R5L3 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Vps39Q8R5L3 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.17□□□□□ -0.46
Vps39Q8R5L3 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps39Q8R5L3 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vps39Q8R5L3 Gm13316-201ENSMUST00000140537 691 ntBASIC12.17□□□□□ -0.46
Vps39Q8R5L3 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 217.7 ms